RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C ATS1P31386 333 aa0.97□□□□□ -2.25
VAM6YDL077C NTH1P32356 751 aa0.97□□□□□ -2.25
VAM6YDL077C EMP70P32802 667 aa0.97□□□□□ -2.25
VAM6YDL077C TKL2P33315 681 aa0.97□□□□□ -2.25
VAM6YDL077C YKL077WP36081 392 aa0.97□□□□□ -2.25
VAM6YDL077C GMH1P36125 273 aa0.97□□□□□ -2.25
VAM6YDL077C PRS4P38063 326 aaPredicted RBP0.97□□□□□ -2.25
VAM6YDL077C YBR096WP38256 230 aa0.97□□□□□ -2.25
VAM6YDL077C YHL041WP38730 149 aa0.97□□□□□ -2.25
VAM6YDL077C YAL037WP39728 267 aa0.97□□□□□ -2.25
VAM6YDL077C HPA3P39979 161 aa0.97□□□□□ -2.25
VAM6YDL077C SNU13P39990 126 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C YEA4P40004 342 aa0.97□□□□□ -2.25
VAM6YDL077C GET2P40056 285 aa0.97□□□□□ -2.25
VAM6YDL077C NSA2P40078 261 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C PRE5P40302 234 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C YJL068CP40363 299 aa0.97□□□□□ -2.25
VAM6YDL077C SDP1P40479 209 aa0.97□□□□□ -2.25
VAM6YDL077C FKH2P41813 862 aa0.97□□□□□ -2.25
VAM6YDL077C CUP9P41817 306 aa0.97□□□□□ -2.25
VAM6YDL077C YAR1P46683 200 aa0.97□□□□□ -2.25
VAM6YDL077C YJR111CP47148 283 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C COX18P53239 316 aa0.97□□□□□ -2.25
VAM6YDL077C PDR17P53844 350 aa0.97□□□□□ -2.25
VAM6YDL077C YIF1P53845 314 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C YNL046WP53956 172 aa0.97□□□□□ -2.25
VAM6YDL077C DIA1P54005 336 aa0.97□□□□□ -2.25
VAM6YDL077C CDC14Q00684 551 aa0.97□□□□□ -2.25
VAM6YDL077C GOT1Q03554 138 aa0.97□□□□□ -2.25
VAM6YDL077C VBA1Q04301 562 aa0.97□□□□□ -2.25
VAM6YDL077C YMR090WQ04304 227 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C UPS1Q05776 175 aa0.97□□□□□ -2.25
VAM6YDL077C BER1Q06688 274 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C SWC7Q06707 132 aa0.97□□□□□ -2.25
VAM6YDL077C YLR030WQ07967 263 aa0.97□□□□□ -2.25
VAM6YDL077C BSC1Q12140 328 aa0.97□□□□□ -2.25
VAM6YDL077C NBP2Q12163 236 aa0.97□□□□□ -2.25
VAM6YDL077C FCY1Q12178 158 aa0.97□□□□□ -2.25
VAM6YDL077C PRS5Q12265 496 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C PRR2Q12310 699 aa0.97□□□□□ -2.25
VAM6YDL077C MRPL23Q12487 163 aaPredicted RBP0.97□□□□□ -2.25
VAM6YDL077C TIF6Q12522 245 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C WIP1Q2V2P8 89 aa0.97□□□□□ -2.25
VAM6YDL077C YCL012CQ8J0M4 134 aa0.97□□□□□ -2.25
VAM6YDL077C FRT1Q99332 602 aa0.97□□□□□ -2.25
VAM6YDL077C MSB2P32334 1306 aa0.97□□□□□ -2.25
VAM6YDL077C YLR422WQ06409 1932 aa0.97□□□□□ -2.25
VAM6YDL077C SOD2P00447 233 aa0.96□□□□□ -2.26
VAM6YDL077C POR1P04840 283 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C RPS13P05756 151 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C RPS22AP0C0W1 130 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C CBS1P14066 229 aa0.96□□□□□ -2.26
VAM6YDL077C SAM35P14693 329 aa0.96□□□□□ -2.26
VAM6YDL077C SAG1P20840 650 aa0.96□□□□□ -2.26
VAM6YDL077C TRX3P25372 127 aa0.96□□□□□ -2.26
VAM6YDL077C PAD1P33751 242 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26 RIP-Chip
VAM6YDL077C RPB7P34087 171 aa0.96□□□□□ -2.26
VAM6YDL077C NNK1P36003 928 aa0.96□□□□□ -2.26
VAM6YDL077C PHD1P36093 366 aa0.96□□□□□ -2.26
VAM6YDL077C DAD2P36162 133 aa0.96□□□□□ -2.26
VAM6YDL077C SPL2P38839 148 aa0.96□□□□□ -2.26
VAM6YDL077C COX15P40086 486 aa0.96□□□□□ -2.26
VAM6YDL077C YER188WP40103 239 aa0.96□□□□□ -2.26
VAM6YDL077C MEP2P41948 499 aa0.96□□□□□ -2.26
VAM6YDL077C YFL054CP43549 646 aa0.96□□□□□ -2.26
VAM6YDL077C RPN11P43588 306 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C ATG27P46989 271 aa0.96□□□□□ -2.26
VAM6YDL077C COQ5P49017 307 aa0.96□□□□□ -2.26
VAM6YDL077C RMD9P53140 646 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C ERG26P53199 349 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C YGR126WP53274 230 aa0.96□□□□□ -2.26
VAM6YDL077C YNR066CP53752 436 aa0.96□□□□□ -2.26
VAM6YDL077C YNL034WP53963 612 aa0.96□□□□□ -2.26
VAM6YDL077C YNL018CP53976 612 aa0.96□□□□□ -2.26
VAM6YDL077C EST3Q03096 181 aa0.96□□□□□ -2.26
VAM6YDL077C ARA2Q04212 335 aa0.96□□□□□ -2.26
VAM6YDL077C ADH6Q04894 360 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C SNO4Q04902 237 aa0.96□□□□□ -2.26
VAM6YDL077C LIP2Q06005 328 aa0.96□□□□□ -2.26
VAM6YDL077C YDL057WQ07379 328 aa0.96□□□□□ -2.26
VAM6YDL077C GPB1Q08886 897 aa0.96□□□□□ -2.26
VAM6YDL077C HSP32Q08992 237 aa0.96□□□□□ -2.26
VAM6YDL077C RAD28Q12021 506 aa0.96□□□□□ -2.26
VAM6YDL077C YDR262WQ12331 272 aa0.96□□□□□ -2.26
VAM6YDL077C YIL102C-AQ2V2P5 75 aa0.96□□□□□ -2.26
VAM6YDL077C YKL018C-AQ3E7A7 99 aa0.96□□□□□ -2.26
VAM6YDL077C YPR014CQ6B0W2 109 aa0.96□□□□□ -2.26
VAM6YDL077C RAS2P01120 322 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C AAC1P04710 309 aa0.96□□□□□ -2.26
VAM6YDL077C HIP1P06775 603 aa0.96□□□□□ -2.26
VAM6YDL077C HMRA1P0CY11 126 aa0.96□□□□□ -2.26
VAM6YDL077C SEC11P15367 167 aa0.96□□□□□ -2.26
VAM6YDL077C SCO1P23833 295 aa0.96□□□□□ -2.26
VAM6YDL077C YCR085WP25650 117 aa0.96□□□□□ -2.26
VAM6YDL077C PRE2P30656 287 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C SRP21P32342 167 aa0.96□□□□□ -2.26
VAM6YDL077C MKK1P32490 508 aa0.96□□□□□ -2.26
VAM6YDL077C CDC5P32562 705 aa0.96□□□□□ -2.26
VAM6YDL077C SRB5P32585 307 aa0.96□□□□□ -2.26
VAM6YDL077C SLC1P33333 303 aa0.96□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 86.9 ms