RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W DAL82P21705 255 aa-0.37□□□□□ -2.47
HMRA1YCR097W YBR285WP38354 144 aa-0.37□□□□□ -2.47
HMRA1YCR097W URA8P38627 578 aaPredicted RBP-0.37□□□□□ -2.47
HMRA1YCR097W YEL008WP40001 126 aa-0.37□□□□□ -2.47
HMRA1YCR097W IRC22P40006 225 aa-0.37□□□□□ -2.47
HMRA1YCR097W LPP1Q04396 274 aa-0.37□□□□□ -2.47
HMRA1YCR097W YPR174CQ06616 221 aaPredicted RBP-0.37□□□□□ -2.47
HMRA1YCR097W YLR413WQ06689 675 aa-0.37□□□□□ -2.47
HMRA1YCR097W PRM3Q08931 133 aa-0.37□□□□□ -2.47
HMRA1YCR097W YRA1Q12159 226 aaKnown RBP-0.37□□□□□ -2.47
HMRA1YCR097W COA3Q3E7B2 85 aa-0.37□□□□□ -2.47
HMRA1YCR097W YIL002W-AQ3E7Z5 69 aa-0.37□□□□□ -2.47
HMRA1YCR097W TIM9O74700 87 aa-0.38□□□□□ -2.47
HMRA1YCR097W MSF1P08425 469 aa-0.38□□□□□ -2.47
HMRA1YCR097W YLR156WP0CE96 114 aa-0.38□□□□□ -2.47
HMRA1YCR097W YLR159WP0CE97 114 aa-0.38□□□□□ -2.47
HMRA1YCR097W YLR161WP0CE98 114 aa-0.38□□□□□ -2.47
HMRA1YCR097W AHT1P29589 182 aa-0.38□□□□□ -2.47
HMRA1YCR097W ECM4P36156 370 aa-0.38□□□□□ -2.47
HMRA1YCR097W MRPL15P36523 253 aa-0.38□□□□□ -2.47
HMRA1YCR097W POP4P38336 279 aa-0.38□□□□□ -2.47
HMRA1YCR097W DOG2P38773 246 aa-0.38□□□□□ -2.47
HMRA1YCR097W YAR064WP39563 99 aa-0.38□□□□□ -2.47
HMRA1YCR097W YPL073CP40323 161 aa-0.38□□□□□ -2.47
HMRA1YCR097W REX3Q12090 404 aa-0.38□□□□□ -2.47
HMRA1YCR097W CDC10P25342 322 aaKnown RBP-0.39□□□□□ -2.47
HMRA1YCR097W RPT5P33297 434 aaKnown RBP-0.39□□□□□ -2.47
HMRA1YCR097W SKG1P36169 355 aa-0.39□□□□□ -2.47
HMRA1YCR097W VMA22P38784 181 aa-0.39□□□□□ -2.47
HMRA1YCR097W DID2P69771 204 aa-0.39□□□□□ -2.47
HMRA1YCR097W YDR391CQ04170 232 aa-0.39□□□□□ -2.47
HMRA1YCR097W YMR226CQ05016 267 aaKnown RBP-0.39□□□□□ -2.47
HMRA1YCR097W CCW12Q12127 133 aa-0.39□□□□□ -2.47
HMRA1YCR097W LSO2Q3E772 92 aaKnown RBP-0.39□□□□□ -2.47
HMRA1YCR097W COX2P00410 251 aa-0.4□□□□□ -2.47
HMRA1YCR097W RPL24AP04449 155 aaKnown RBP-0.4□□□□□ -2.47
HMRA1YCR097W YHL037CP38733 133 aa-0.4□□□□□ -2.47
HMRA1YCR097W HPA3P39979 161 aa-0.4□□□□□ -2.47
HMRA1YCR097W YER034WP40022 185 aaKnown RBP-0.4□□□□□ -2.47
HMRA1YCR097W YFL051CP43552 160 aa-0.4□□□□□ -2.47
HMRA1YCR097W UPS3Q04006 179 aa-0.4□□□□□ -2.47
HMRA1YCR097W YPR203WQ08994 102 aa-0.4□□□□□ -2.47
HMRA1YCR097W BTS1Q12051 335 aa-0.4□□□□□ -2.47
HMRA1YCR097W YLR126CQ12288 251 aa-0.4□□□□□ -2.47
HMRA1YCR097W YPL229WQ99395 206 aa-0.4□□□□□ -2.47
HMRA1YCR097W UBC8P28263 218 aa-0.41□□□□□ -2.48
HMRA1YCR097W TVP23P38962 199 aa-0.41□□□□□ -2.48
HMRA1YCR097W EMC2P47133 292 aaKnown RBP-0.41□□□□□ -2.48
HMRA1YCR097W COX20Q04935 205 aa-0.41□□□□□ -2.48
HMRA1YCR097W TPM1P17536 199 aaKnown RBP-0.42□□□□□ -2.48
HMRA1YCR097W DAL80P26343 269 aa-0.42□□□□□ -2.48
HMRA1YCR097W SRB4P32569 687 aa-0.42□□□□□ -2.48
HMRA1YCR097W RPB7P34087 171 aa-0.42□□□□□ -2.48
HMRA1YCR097W YKL075CP36083 450 aa-0.42□□□□□ -2.48
HMRA1YCR097W YDR274CP87283 123 aa-0.42□□□□□ -2.48
HMRA1YCR097W EGD1Q02642 157 aaKnown RBP-0.42□□□□□ -2.48
HMRA1YCR097W BNA7Q04066 261 aa-0.42□□□□□ -2.48
HMRA1YCR097W CSM4Q08955 156 aa-0.42□□□□□ -2.48
HMRA1YCR097W ODC2Q99297 307 aa-0.42□□□□□ -2.48
HMRA1YCR097W YAR1P46683 200 aa-0.43□□□□□ -2.48
HMRA1YCR097W MET31Q03081 177 aa-0.43□□□□□ -2.48
HMRA1YCR097W FYV12Q08559 129 aa-0.43□□□□□ -2.48
HMRA1YCR097W MGM101P32787 269 aaKnown RBP-0.44□□□□□ -2.48
HMRA1YCR097W YBR242WP38331 238 aa-0.44□□□□□ -2.48
HMRA1YCR097W DCV1P43595 202 aa-0.44□□□□□ -2.48
HMRA1YCR097W YJR111CP47148 283 aaKnown RBP-0.44□□□□□ -2.48
HMRA1YCR097W MCM22P47167 239 aa-0.44□□□□□ -2.48
HMRA1YCR097W PRM8P53174 237 aa-0.44□□□□□ -2.48
HMRA1YCR097W SDO1Q07953 250 aaKnown RBP-0.44□□□□□ -2.48
HMRA1YCR097W MCP1Q12106 302 aa-0.44□□□□□ -2.48
HMRA1YCR097W TDA8Q6B2U8 126 aa-0.44□□□□□ -2.48
HMRA1YCR097W YHR213W-BQ8TGK1 99 aa-0.44□□□□□ -2.48
HMRA1YCR097W DRS2P39524 1355 aa-0.45□□□□□ -2.48
HMRA1YCR097W URA5P13298 226 aaKnown RBP-0.45□□□□□ -2.48
HMRA1YCR097W POL30P15873 258 aaKnown RBP-0.45□□□□□ -2.48
HMRA1YCR097W NSA1P53136 463 aaPredicted RBP-0.45□□□□□ -2.48
HMRA1YCR097W DAD4P69851 72 aa-0.45□□□□□ -2.48
HMRA1YCR097W FIT1Q04433 528 aa-0.45□□□□□ -2.48
HMRA1YCR097W RPL27AP0C2H6 136 aaKnown RBP-0.46□□□□□ -2.48
HMRA1YCR097W DBP3P20447 523 aaKnown RBP-0.46□□□□□ -2.48
HMRA1YCR097W BET1P22804 142 aa-0.46□□□□□ -2.48
HMRA1YCR097W YHL018WP38744 120 aaPredicted RBP-0.46□□□□□ -2.48
HMRA1YCR097W PET100P38958 111 aa-0.46□□□□□ -2.48
HMRA1YCR097W GCN20P43535 752 aaKnown RBP-0.46□□□□□ -2.48
HMRA1YCR097W YJR149WP47177 404 aa-0.46□□□□□ -2.48
HMRA1YCR097W LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.46□□□□□ -2.48not detected
HMRA1YCR097W YLR173WQ06247 608 aa-0.46□□□□□ -2.48
HMRA1YCR097W PRP11Q07350 266 aaPredicted RBP-0.46□□□□□ -2.48
HMRA1YCR097W COX8P04039 78 aa-0.47□□□□□ -2.48
HMRA1YCR097W SPO13P23624 291 aa-0.47□□□□□ -2.48
HMRA1YCR097W SEC17P32602 292 aa-0.47□□□□□ -2.48
HMRA1YCR097W RTT105P40063 208 aa-0.47□□□□□ -2.48
HMRA1YCR097W YJR015WP47090 510 aa-0.47□□□□□ -2.48
HMRA1YCR097W NUP84P52891 726 aa-0.47□□□□□ -2.48
HMRA1YCR097W FIT2Q08906 153 aa-0.47□□□□□ -2.48
HMRA1YCR097W YPR013CQ12145 317 aa-0.47□□□□□ -2.48
HMRA1YCR097W TCP1P12612 559 aaKnown RBP-0.48□□□□□ -2.49
HMRA1YCR097W KRR1P25586 316 aaPredicted RBP-0.48□□□□□ -2.49
HMRA1YCR097W PTM1P32857 523 aa-0.48□□□□□ -2.49
HMRA1YCR097W UTP30P36144 274 aaKnown RBP-0.48□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 168.2 ms