RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAF1YBR279W YLR156WP0CE96 114 aa2.57□□□□□ -2
PAF1YBR279W YLR159WP0CE97 114 aa2.57□□□□□ -2
PAF1YBR279W YLR161WP0CE98 114 aa2.57□□□□□ -2
PAF1YBR279W DBF2P22204 572 aa2.57□□□□□ -2
PAF1YBR279W RTC3P38804 111 aaPredicted RBP2.57□□□□□ -2
PAF1YBR279W IRC18P47056 224 aa2.57□□□□□ -2
PAF1YBR279W PGA2P53903 129 aa2.57□□□□□ -2
PAF1YBR279W TSC3Q3E790 80 aa2.57□□□□□ -2
PAF1YBR279W TDA8Q6B2U8 126 aa2.57□□□□□ -2
PAF1YBR279W PRP18P33411 251 aaPredicted RBP2.56□□□□□ -2
PAF1YBR279W RMD6P39975 231 aa2.56□□□□□ -2
PAF1YBR279W AVT2P39981 480 aa2.56□□□□□ -2
PAF1YBR279W ADO1P47143 340 aaKnown RBP2.56□□□□□ -2
PAF1YBR279W RAD17P48581 401 aa2.56□□□□□ -2
PAF1YBR279W BNA7Q04066 261 aa2.56□□□□□ -2
PAF1YBR279W GCN3P14741 305 aa2.55□□□□□ -2
PAF1YBR279W MGM101P32787 269 aaKnown RBP2.55□□□□□ -2
PAF1YBR279W YET1P35723 206 aa2.55□□□□□ -2
PAF1YBR279W CBT1P36038 271 aaPredicted RBP2.55□□□□□ -2
PAF1YBR279W YNL217WP40152 326 aa2.55□□□□□ -2
PAF1YBR279W MGA1P53050 456 aa2.55□□□□□ -2
PAF1YBR279W SML1Q04964 104 aa2.55□□□□□ -2
PAF1YBR279W NTG1P31378 399 aa2.54□□□□□ -2
PAF1YBR279W SNC2P33328 115 aa2.54□□□□□ -2
PAF1YBR279W AST2P39945 430 aaKnown RBP2.54□□□□□ -2
PAF1YBR279W YNL194CP40169 301 aa2.54□□□□□ -2
PAF1YBR279W SWP1Q02795 286 aa2.54□□□□□ -2
PAF1YBR279W GAS3Q03655 524 aa2.54□□□□□ -2
PAF1YBR279W YOL162WP0CF19 215 aa2.53□□□□□ -2
PAF1YBR279W UMP1P38293 148 aa2.53□□□□□ -2
PAF1YBR279W PDR17P53844 350 aa2.53□□□□□ -2
PAF1YBR279W SPG3Q04398 127 aaPredicted RBP2.53□□□□□ -2
PAF1YBR279W RPL27BP0C2H7 136 aaKnown RBP2.52□□□□□ -2.01
PAF1YBR279W IDH1P28834 360 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
PAF1YBR279W PRX1P34227 261 aaKnown RBP2.52□□□□□ -2.01
PAF1YBR279W TRM5P38793 499 aa2.52□□□□□ -2.01
PAF1YBR279W CDC33P07260 213 aaKnown RBP2.51□□□□□ -2.01
PAF1YBR279W RPB4P20433 221 aaPredicted RBP2.51□□□□□ -2.01
PAF1YBR279W TCA17P32613 152 aa2.51□□□□□ -2.01
PAF1YBR279W YER135CP40082 130 aa2.51□□□□□ -2.01
PAF1YBR279W BOL2P53082 120 aa2.51□□□□□ -2.01
PAF1YBR279W FZF1P32805 299 aa2.5□□□□□ -2.01
PAF1YBR279W PTM1P32857 523 aa2.5□□□□□ -2.01
PAF1YBR279W MRPL17P36528 281 aa2.5□□□□□ -2.01
PAF1YBR279W YBR219CP38317 127 aa2.5□□□□□ -2.01
PAF1YBR279W DOC1P53068 250 aa2.5□□□□□ -2.01
PAF1YBR279W SAY1P53324 424 aa2.5□□□□□ -2.01
PAF1YBR279W MDM32Q12171 622 aa2.5□□□□□ -2.01
PAF1YBR279W MET5P47169 1442 aa2.5□□□□□ -2.01
PAF1YBR279W TIM9O74700 87 aa2.49□□□□□ -2.01
PAF1YBR279W RPL25P04456 142 aaKnown RBP2.49□□□□□ -2.01
PAF1YBR279W URA5P13298 226 aaKnown RBP2.49□□□□□ -2.01
PAF1YBR279W KSS1P14681 368 aa2.49□□□□□ -2.01
PAF1YBR279W CWC23P52868 283 aaPredicted RBP2.49□□□□□ -2.01
PAF1YBR279W TIM11P81449 96 aaPredicted RBP2.49□□□□□ -2.01
PAF1YBR279W BET1P22804 142 aa2.48□□□□□ -2.01
PAF1YBR279W YKR045CP36138 183 aa2.48□□□□□ -2.01
PAF1YBR279W GVP36P40531 326 aaKnown RBP2.48□□□□□ -2.01
PAF1YBR279W YMR226CQ05016 267 aaKnown RBP2.48□□□□□ -2.01
PAF1YBR279W YPL162CQ12042 273 aa2.48□□□□□ -2.01
PAF1YBR279W YDR157WA0A023PZE8 133 aa2.47□□□□□ -2.01
PAF1YBR279W SEC17P32602 292 aa2.47□□□□□ -2.01
PAF1YBR279W SIP3P38717 1229 aa2.47□□□□□ -2.01
PAF1YBR279W IKI1P38874 309 aa2.47□□□□□ -2.01
PAF1YBR279W YRB2P40517 327 aa2.47□□□□□ -2.01
PAF1YBR279W CWC21Q03375 135 aaKnown RBP2.47□□□□□ -2.01
PAF1YBR279W MCP1Q12106 302 aa2.47□□□□□ -2.01
PAF1YBR279W FLO9P39712 1322 aa2.47□□□□□ -2.01
PAF1YBR279W SEC4P07560 215 aaKnown RBP2.46□□□□□ -2.02
PAF1YBR279W MAG1P22134 296 aaKnown RBP2.46□□□□□ -2.02
PAF1YBR279W YGR050CP53231 118 aa2.46□□□□□ -2.02
PAF1YBR279W GPM2Q12008 311 aa2.46□□□□□ -2.02
PAF1YBR279W GIS3Q12418 502 aa2.46□□□□□ -2.02
PAF1YBR279W TUS1Q06412 1307 aa2.46□□□□□ -2.02
PAF1YBR279W ARG80P07249 177 aa2.45□□□□□ -2.02
PAF1YBR279W YGL010WP25338 174 aa2.45□□□□□ -2.02
PAF1YBR279W TFC1P32367 649 aa2.45□□□□□ -2.02
PAF1YBR279W TMA19P35691 167 aaKnown RBP2.45□□□□□ -2.02
PAF1YBR279W UTP30P36144 274 aaKnown RBP2.45□□□□□ -2.02
PAF1YBR279W YBR209WP38311 105 aa2.45□□□□□ -2.02
PAF1YBR279W EAF6P47128 113 aa2.45□□□□□ -2.02
PAF1YBR279W LSM7P53905 115 aaKnown RBP2.45□□□□□ -2.02
PAF1YBR279W YCR087C-AP37263 153 aa2.44□□□□□ -2.02
PAF1YBR279W YBR285WP38354 144 aa2.44□□□□□ -2.02
PAF1YBR279W GAA1P39012 614 aa2.44□□□□□ -2.02
PAF1YBR279W CGR1P53188 120 aa2.44□□□□□ -2.02
PAF1YBR279W YDR249CQ03787 373 aa2.44□□□□□ -2.02
PAF1YBR279W FSF1Q12029 327 aaKnown RBP2.44□□□□□ -2.02
PAF1YBR279W YHR214C-EQ8TGK0 99 aa2.44□□□□□ -2.02
PAF1YBR279W BEM2P39960 2167 aaKnown RBP2.44□□□□□ -2.02
PAF1YBR279W MER1P16523 270 aa2.43□□□□□ -2.02
PAF1YBR279W CKS1P20486 150 aaKnown RBP2.43□□□□□ -2.02
PAF1YBR279W RPL13BP40212 199 aaKnown RBP2.43□□□□□ -2.02
PAF1YBR279W YNR077CP53758 84 aa2.43□□□□□ -2.02
PAF1YBR279W COG5P53951 403 aa2.43□□□□□ -2.02
PAF1YBR279W ANT1Q06497 328 aa2.43□□□□□ -2.02
PAF1YBR279W CSI2Q08054 341 aa2.43□□□□□ -2.02
PAF1YBR279W YRA1Q12159 226 aaKnown RBP2.43□□□□□ -2.02
PAF1YBR279W RPL13AQ12690 199 aaPredicted RBP2.43□□□□□ -2.02
PAF1YBR279W SHE2P36068 246 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms