RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 MIS12Q9H081 205 aa10.41□□□□□ -0.74
PHGDH-215ENST00000641371 PDCL3Q9H2J4 239 aa10.41□□□□□ -0.74
PHGDH-215ENST00000641371 AVENQ9NQS1 362 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-215ENST00000641371 ARGLU1Q9NWB6 273 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-215ENST00000641371 CNTN3Q9P232 1028 aa10.41□□□□□ -0.74
PHGDH-215ENST00000641371 TRIM10Q9UDY6 481 aa10.41□□□□□ -0.74
PHGDH-215ENST00000641371 GTF3C4Q9UKN8 822 aa10.41□□□□□ -0.74
PHGDH-215ENST00000641371 KIAA1257Q9ULG3 409 aa10.41□□□□□ -0.74
PHGDH-215ENST00000641371 UBQLN1Q9UMX0 589 aaKnown RBP10.41□□□□□ -0.74
PHGDH-215ENST00000641371 PDCD11Q14690 1871 aaKnown RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 GRID2IPA4D2P6 1211 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 MIF4GDA9UHW6 222 aaKnown RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 TLR3O15455 904 aaKnown RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 TADA3O75528 432 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 TRPA1O75762 1119 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 MOCS3O95396 460 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 SGPL1O95470 568 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 NPTXRO95502 500 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 FTLP02792 175 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 ASGR1P07306 291 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 FAM163BP0C2L3 166 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 ACO1P21399 889 aaKnown RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 GNA15P30679 374 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 HOXA11P31270 313 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 RAB27AP51159 221 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 ZNF132P52740 706 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 CHMP4BP1P59074 171 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 FMO1Q01740 532 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 PTK7Q13308 1070 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 CLEC16AQ2KHT3 1053 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 NBPF20Q3BBV1 942 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 SLC10A6Q3KNW5 377 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 LIN9Q5TKA1 542 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 LMBRD2Q68DH5 695 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 JADE1Q6IE81 842 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 C11orf63Q6NUN7 778 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 RUFY4Q6ZNE9 571 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 ZNF572Q7Z3I7 529 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 SLFN11Q7Z7L1 901 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 NOP9Q86U38 636 aaKnown RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 GPR161Q8N6U8 529 aaKnown RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 UBR7Q8N806 425 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 RBBP8NLQ8NC74 664 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 TPCN2Q8NHX9 752 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 CD99L2Q8TCZ2 262 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 RABGGTAQ92696 567 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 KAT5Q92993 513 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 LENG1Q96BZ8 264 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 CPB2Q96IY4 423 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 SNX27Q96L92 541 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 ZNF560Q96MR9 790 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 GLT1D1Q96MS3 346 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 PI4K2AQ9BTU6 479 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 SELENOOQ9BVL4 669 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 CARD6Q9BX69 1037 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 BCO2Q9BYV7 579 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 MRPL47Q9HD33 250 aaKnown RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 HMX1Q9NP08 348 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 PIN4Q9Y237 131 aaKnown RBP10.4□□□□□ -0.74
PHGDH-215ENST00000641371 NUB1Q9Y5A7 615 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 CAPN6Q9Y6Q1 641 aa10.4□□□□□ -0.74
PHGDH-215ENST00000641371 A0A0U1RQJ8 604 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 RPS6KA5O75582 802 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 PALMO75781 387 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 ECM2O94769 699 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-215ENST00000641371 PGK1P00558 417 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 KRT19P08727 400 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 PNMA6AP0CW24 399 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-215ENST00000641371 KCNE1P15382 129 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 NSFP46459 744 aaKnown RBP10.39□□□□□ -0.75
PHGDH-215ENST00000641371 WNT7BP56706 349 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 MYL6P60660 151 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 OSTNP61366 133 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 TNNC1P63316 161 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 CENPCQ03188 943 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 TAP1Q03518 808 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 RPS6KA1Q15418 735 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 KCNA10Q16322 511 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 PPP2R5EQ16537 467 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 CFAP221Q4G0U5 840 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 XKR4Q5GH76 650 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 FAM47CQ5HY64 1035 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 MEI1Q5TIA1 1274 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 CCDC181Q5TID7 509 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 CCSAPQ6IQ19 270 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-215ENST00000641371 TMEM270Q6UE05 265 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 CXCL17Q6UXB2 119 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 SLC47A2Q86VL8 602 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 CEP120Q8N960 986 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 C1orf127Q8N9H9 656 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 CAGE1Q8TC20 777 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 ATRIPQ8WXE1 791 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 DDX1Q92499 740 aaKnown RBP10.39□□□□□ -0.75
PHGDH-215ENST00000641371 ZBTB10Q96DT7 871 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 KIF12Q96FN5 646 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 ZNF668Q96K58 619 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-215ENST00000641371 NAP1L3Q99457 506 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-215ENST00000641371 TRAIPQ9BWF2 469 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 PLVAPQ9BX97 442 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 XYLT2Q9H1B5 865 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms