RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 C2CD6Q53TS8 623 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 C1orf220Q5T0J3 134 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 ARHGAP27Q6ZUM4 889 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 ZNF365Q70YC5 407 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 METTL13Q8N6R0 699 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 SEMA4DQ92854 862 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 TMEM143Q96AN5 459 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 BTBD6Q96KE9 485 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 STK33Q9BYT3 514 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 KMT5AQ9NQR1 393 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 ZNF214Q9UL59 606 aaPredicted RBP13.16□□□□□ -0.3
SPIN3-236ENST00000640131 HMGB1P1B2RPK0 211 aaPredicted RBP13.16□□□□□ -0.3
SPIN3-236ENST00000640131 HNRNPRO43390 633 aaKnown RBP13.16□□□□□ -0.3
SPIN3-236ENST00000640131 SGPL1O95470 568 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 SP2Q02086 613 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 TREML2Q5T2D2 321 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 FOXB2Q5VYV0 432 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 MOB2Q70IA6 237 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 OLIG1Q8TAK6 271 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 POMGNT1Q8WZA1 660 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 INPP4AQ96PE3 977 aaPredicted RBP13.16□□□□□ -0.3
SPIN3-236ENST00000640131 A8MUI8 341 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 EIF3FO00303 357 aaPredicted RBP13.16□□□□□ -0.3
SPIN3-236ENST00000640131 CYP26A1O43174 497 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 CCND2P30279 289 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 MXI1P50539 228 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 CLCN2P51788 898 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 HLTFQ14527 1009 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPIN3-236ENST00000640131 SNRNP35Q16560 246 aaKnown RBP13.16□□□□□ -0.3
SPIN3-236ENST00000640131 OR52E8Q6IFG1 317 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 MPHOSPH6Q99547 160 aaKnown RBP13.16□□□□□ -0.3
SPIN3-236ENST00000640131 STRA6Q9BX79 667 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 CELF4Q9BZC1 486 aaKnown RBP13.16□□□□□ -0.3
SPIN3-236ENST00000640131 TMEM117Q9H0C3 514 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 LRRC42Q9Y546 428 aa13.16□□□□□ -0.3
SPIN3-236ENST00000640131 PFASO15067 1338 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 HNRNPDLO14979 420 aaKnown RBP13.15□□□□□ -0.3
SPIN3-236ENST00000640131 HOXD12P35452 270 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 PRKCIP41743 596 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 PAK2Q13177 524 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 DMP1Q13316 513 aaPredicted RBP13.15□□□□□ -0.3
SPIN3-236ENST00000640131 FAM133BQ5BKY9 247 aaKnown RBP13.15□□□□□ -0.3
SPIN3-236ENST00000640131 DCAF15Q66K64 600 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 SLC47A2Q86VL8 602 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 VSIG10LQ86VR7 867 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 SESTD1Q86VW0 696 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 SAMD3Q8N6K7 520 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 LRRC57Q8N9N7 239 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 LMO3Q8TAP4 145 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 IFT43Q96FT9 208 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 ITM2BQ9Y287 266 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 NOC2LQ9Y3T9 749 aaKnown RBP13.15□□□□□ -0.3
SPIN3-236ENST00000640131 NR2E1Q9Y466 385 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 PCDHA10Q9Y5I2 948 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 PRLRP16471 622 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 ATP6V1C1P21283 382 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 PRKCEQ02156 737 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 CCDC197Q8NCU1 140 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 CAVIN3Q969G5 261 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 ZNF653Q96CK0 615 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 FAM213AQ9BRX8 229 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 MKNK1Q9BUB5 465 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 MTFR1LQ9H019 292 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 KCND2Q9NZV8 630 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 TBX20Q9UMR3 447 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 COG5Q9UP83 839 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 CHMP2BQ9UQN3 213 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 SH3GLB1Q9Y371 365 aa13.15□□□□□ -0.3
SPIN3-236ENST00000640131 GOLGA6L10A0A0M3HER8 536 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 TRIM43BA6NCK2 446 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 NDUFB5O43674 189 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 MLH1P40692 756 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 MARCKSL1P49006 195 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 SMUG1Q53HV7 270 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 SLC39A4Q6P5W5 647 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 IQCKQ8N0W5 287 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 ANKRD35Q8N283 1001 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 USP38Q8NB14 1042 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 TMEM161BQ8NDZ6 487 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 TAS1R2Q8TE23 839 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 CASKIN2Q8WXE0 1202 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 NR1H4Q96RI1 486 aaPredicted RBP13.14□□□□□ -0.31
SPIN3-236ENST00000640131 CARD9Q9H257 536 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 TMEM206Q9H813 350 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 JPH1Q9HDC5 661 aaPredicted RBP13.14□□□□□ -0.31
SPIN3-236ENST00000640131 CYP39A1Q9NYL5 469 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 AMACRQ9UHK6 382 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 ADM5C9JUS6 153 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 DDNO94850 711 aaPredicted RBP13.14□□□□□ -0.31
SPIN3-236ENST00000640131 TMOD1P28289 359 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 DSG3P32926 999 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 TRPC1P48995 793 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 ACOT2P49753 483 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 ACTR2P61160 394 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 KRT76Q01546 638 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 INTS8Q75QN2 995 aaKnown RBP13.14□□□□□ -0.31
SPIN3-236ENST00000640131 C4orf19Q8IY42 314 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 SLC30A5Q8TAD4 765 aa13.14□□□□□ -0.31
SPIN3-236ENST00000640131 DPH5Q9H2P9 285 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms