RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 PDE2AO00408 941 aaPredicted RBP15.21■□□□□ 0.03
SCARB2-216ENST00000639300 MAP3K6O95382 1288 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 KRT10P13645 584 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 MAGEA4P43358 317 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 EPHB1P54762 984 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 TAP1Q03518 808 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 OTOP1Q7RTM1 612 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 FEZF2Q8TBJ5 459 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 HAS1Q92839 578 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 CYFIP2Q96F07 1278 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 KLC4Q9NSK0 619 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 AIPL1Q9NZN9 384 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 BFARQ9NZS9 450 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 CHMP2BQ9UQN3 213 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 DYNC1LI2O43237 492 aaPredicted RBP15.21■□□□□ 0.03
SCARB2-216ENST00000639300 LUC7L3O95232 432 aaKnown RBP15.21■□□□□ 0.03
SCARB2-216ENST00000639300 RARRES1P49788 294 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 NBPF12Q5TAG4 269 aaPredicted RBP15.21■□□□□ 0.03
SCARB2-216ENST00000639300 ATF7IP2Q5U623 682 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 LRRC31Q6UY01 552 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 GMCL1P1Q8NEA9 526 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 ATP8B4Q8TF62 1192 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 PABPC3Q9H361 631 aaKnown RBP15.21■□□□□ 0.03
SCARB2-216ENST00000639300 SMARCAD1Q9H4L7 1026 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 CPSF2Q9P2I0 782 aaKnown RBP15.21■□□□□ 0.03
SCARB2-216ENST00000639300 TRAF3IP3Q9Y228 551 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 MOCS2O96007 188 aaPredicted RBP15.21■□□□□ 0.02
SCARB2-216ENST00000639300 R3HDM1Q15032 1099 aaKnown RBP15.21■□□□□ 0.02
SCARB2-216ENST00000639300 EFCAB12Q6NXP0 572 aa15.21■□□□□ 0.02
SCARB2-216ENST00000639300 WDR59Q6PJI9 974 aa15.21■□□□□ 0.02
SCARB2-216ENST00000639300 CERS5Q8N5B7 392 aa15.21■□□□□ 0.02
SCARB2-216ENST00000639300 CCNYL1Q8N7R7 359 aa15.21■□□□□ 0.02
SCARB2-216ENST00000639300 SPATA18Q8TC71 538 aa15.21■□□□□ 0.02
SCARB2-216ENST00000639300 AGR3Q8TD06 166 aa15.21■□□□□ 0.02
SCARB2-216ENST00000639300 NIF3L1Q9GZT8 377 aa15.21■□□□□ 0.02
SCARB2-216ENST00000639300 RAB21Q9UL25 225 aa15.21■□□□□ 0.02
SCARB2-216ENST00000639300 PIN4Q9Y237 131 aaKnown RBP15.21■□□□□ 0.02
SCARB2-216ENST00000639300 ASB14A6NK59 587 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 TYK2P29597 1187 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 MEA1Q16626 185 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 PTGISQ16647 500 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 AGBL2Q5U5Z8 902 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 TPX2Q9ULW0 747 aaKnown RBP15.2■□□□□ 0.02
SCARB2-216ENST00000639300 APOBEC2Q9Y235 224 aaKnown RBP15.2■□□□□ 0.02
SCARB2-216ENST00000639300 RICTORQ6R327 1708 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 CCDC78A2IDD5 438 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 RCCD1A6NED2 376 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 RBP5P82980 135 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 PIGHQ14442 188 aaPredicted RBP15.2■□□□□ 0.02
SCARB2-216ENST00000639300 FBXO41Q8TF61 875 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 TCHHQ07283 1943 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 CAMTA1Q9Y6Y1 1673 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 TISP43B9A030 160 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 ATP9BO43861 1147 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 FAM107AO95990 144 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 CASP2P42575 452 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 ART3Q13508 389 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 C3orf62Q6ZUJ4 267 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 ZNF507Q8TCN5 953 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 GPRASP2Q96D09 838 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 SIGLEC1Q9BZZ2 1709 aa15.2■□□□□ 0.02
SCARB2-216ENST00000639300 DDX3XO00571 662 aaKnown RBP eCLIP15.19■□□□□ 0.023e-14■■■■■ 29.4
SCARB2-216ENST00000639300 BNIP3LO60238 219 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 DIAPH2O60879 1101 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 SKIP12755 728 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 TCF7P36402 384 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-216ENST00000639300 STX1BP61266 288 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 TMEM132DQ14C87 1099 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 GRAMD1BQ3KR37 738 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 CREG2Q8IUH2 290 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 TATDN2Q93075 761 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 PPP1R9AQ9ULJ8 1098 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 SIK3Q9Y2K2 1263 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-216ENST00000639300 PFDN6O15212 129 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 VCAM1P19320 739 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 PMLP29590 882 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 CUL2Q13617 745 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 KCNT1Q5JUK3 1230 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 DACT2Q5SW24 774 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 VPS39Q96JC1 886 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 LCMT1Q9UIC8 334 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 CSDE1O75534 798 aaKnown RBP15.19■□□□□ 0.02
SCARB2-216ENST00000639300 FAM153BP0C7A2 387 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 TSTA3Q13630 321 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-216ENST00000639300 FAM153CQ494X1 144 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 TAF1BQ53T94 588 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-216ENST00000639300 SYDE1Q6ZW31 735 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-216ENST00000639300 WDR35Q9P2L0 1181 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 FAM153AQ9UHL3 310 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 ARL2BPQ9Y2Y0 163 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 SPECC1L-ADORA2AF8WAN1 911 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 EFHC2Q5JST6 749 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 FASTKD5Q7L8L6 764 aaKnown RBP15.19■□□□□ 0.02
SCARB2-216ENST00000639300 PARP9Q8IXQ6 854 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 C2orf69Q8N8R5 385 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 EPS8L3Q8TE67 593 aaKnown RBP15.19■□□□□ 0.02
SCARB2-216ENST00000639300 MTMR12Q9C0I1 747 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 C17orf75Q9HAS0 396 aa15.19■□□□□ 0.02
SCARB2-216ENST00000639300 MARCOQ9UEW3 520 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms