RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 DGKHQ86XP1 1220 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 TMPRSS6Q8IU80 811 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 RASGRP4Q8TDF6 673 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 FAM89AQ96GI7 184 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 RIOK1Q9BRS2 568 aaKnown RBP12.71□□□□□ -0.37
CAPN3-221ENST00000638141 NRDE2Q9H7Z3 1164 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 PPCSQ9HAB8 311 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 BMP2KQ9NSY1 1161 aaPredicted RBP12.71□□□□□ -0.37
CAPN3-221ENST00000638141 NINJ2Q9NZG7 142 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 KANSL3Q9P2N6 904 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 TRAF3IP3Q9Y228 551 aa12.71□□□□□ -0.37
CAPN3-221ENST00000638141 P4HA2O15460 535 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 CIB2O75838 187 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 TFAP2AP05549 437 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 CETPP11597 493 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 MAN1A1P33908 653 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 HALP42357 657 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 CREB5Q02930 508 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 KCTD19Q17RG1 926 aaPredicted RBP12.71□□□□□ -0.38
CAPN3-221ENST00000638141 USP41Q3LFD5 358 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 RASSF3Q86WH2 238 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 LARGE2Q8N3Y3 721 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 SYT2Q8N9I0 419 aaPredicted RBP12.71□□□□□ -0.38
CAPN3-221ENST00000638141 CCDC110Q8TBZ0 833 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 U2AF1L4Q8WU68 220 aaKnown RBP12.71□□□□□ -0.38
CAPN3-221ENST00000638141 CGREF1Q99674 301 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 TCHPQ9BT92 498 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 MRPS26Q9BYN8 205 aaKnown RBP12.71□□□□□ -0.38
CAPN3-221ENST00000638141 OSGEPQ9NPF4 335 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 LRP2BPQ9P2M1 347 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 ASAP1Q9ULH1 1129 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 MTO1Q9Y2Z2 717 aaKnown RBP12.71□□□□□ -0.38
CAPN3-221ENST00000638141 NUMBLQ9Y6R0 609 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 SBF2Q86WG5 1849 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 TOGARAM1Q9Y4F4 1720 aa12.71□□□□□ -0.38
CAPN3-221ENST00000638141 A0A1W2PRG0 241 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 THAP12O43422 761 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 PEX1O43933 1283 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 SORBS3O60504 671 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 PDE8AO60658 829 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 TGDSO95455 350 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 ZBED1O96006 694 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 VCLP18206 1134 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 GNA11P29992 359 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 CETN2P41208 172 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 STAT1P42224 750 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 TECP42680 631 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 LPIN1Q14693 890 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 SEL1L2Q5TEA6 688 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 MFSD4BQ5TF39 518 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 LRRC8BQ6P9F7 803 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 TREML1Q86YW5 311 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 MARVELD2Q8N4S9 558 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 FAM172AQ8WUF8 416 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 SPOCK2Q92563 424 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 DNAJC19Q96DA6 116 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 MTMR9Q96QG7 549 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 FOXP3Q9BZS1 431 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 HDAC9Q9UKV0 1011 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 DOT1LQ8TEK3 1739 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 BAZ2BQ9UIF8 2168 aaKnown RBP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 CICQ96RK0 1608 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 CCNT1O60563 726 aaKnown RBP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 ZBED4O75132 1171 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 TM7SF2O76062 418 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 IL1BP01584 269 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 PYGMP11217 842 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 ESRRAP11474 423 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 PON1P27169 355 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 ARFIP2P53365 341 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 CDK16Q00536 496 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 ZNF211Q13398 564 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 CTTNQ14247 550 aaKnown RBP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 PDK3Q15120 406 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 SIX1Q15475 284 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 PLEKHG4Q58EX7 1191 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 KRT79Q5XKE5 535 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 THOC7Q6I9Y2 204 aaKnown RBP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 ADAT2Q7Z6V5 191 aaKnown RBP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 CCDC105Q8IYK2 499 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 ZDHHC14Q8IZN3 488 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 SCAIQ8N9R8 606 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 MIGA1Q8NAN2 632 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 ZNF75CPQ92670 426 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 GPKOWQ92917 476 aaPredicted RBP eCLIP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 SNF8Q96H20 258 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 DHRS1Q96LJ7 313 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 BIRC8Q96P09 236 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 ZSWIM1Q9BR11 485 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 SYT11Q9BT88 431 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 KCTD10Q9H3F6 313 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 C6orf50Q9HD87 102 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 HESX1Q9UBX0 185 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 ZNF180Q9UJW8 692 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 PADI4Q9UM07 663 aa12.7□□□□□ -0.38
CAPN3-221ENST00000638141 HBS1LQ9Y450 684 aaKnown RBP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 CTDP1Q9Y5B0 961 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-221ENST00000638141 CACNA1SQ13698 1873 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 ESYT2A0FGR8 921 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 BOLA2-SMG1P6H3BVE0 249 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms