RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 CCDC105Q8IYK2 499 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 TMEM130Q8N3G9 435 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 DDX12PQ92771 950 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 TBC1D17Q9HA65 648 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 ARHGEF3Q9NR81 526 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 UBQLN1Q9UMX0 589 aaKnown RBP21.87■■□□□ 1.09
CLN6-222ENST00000637667 PCDHB8Q9UN66 801 aa21.87■■□□□ 1.09
CLN6-222ENST00000637667 MRPS23Q9Y3D9 190 aaKnown RBP21.87■■□□□ 1.09
CLN6-222ENST00000637667 A0A0B4J269 797 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 LACTBL1A8MY62 500 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 OGTO15294 1046 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 FAM189A1O60320 539 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 LRG1P02750 347 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 RHOP08100 348 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 CYP3A5P20815 502 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 MARCKSP29966 332 aaPredicted RBP21.86■■□□□ 1.09
CLN6-222ENST00000637667 DDIT3P35638 169 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 ENOX2Q16206 610 aaKnown RBP21.86■■□□□ 1.09
CLN6-222ENST00000637667 TPGS2Q68CL5 300 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 USP49Q70CQ1 688 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 TCEAL8Q8IYN2 117 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 DTWD2Q8NBA8 298 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 ING5Q8WYH8 240 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 EPSTI1Q96J88 318 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 FIZ1Q96SL8 496 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 MSTO1Q9BUK6 570 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 RPF1Q9H9Y2 349 aaKnown RBP21.86■■□□□ 1.09
CLN6-222ENST00000637667 CYP4F11Q9HBI6 524 aa21.86■■□□□ 1.09
CLN6-222ENST00000637667 FAM186AA6NE01 2351 aa21.85■■□□□ 1.09
CLN6-222ENST00000637667 SEC24AO95486 1093 aa21.85■■□□□ 1.09
CLN6-222ENST00000637667 NMT1P30419 496 aaKnown RBP21.85■■□□□ 1.09
CLN6-222ENST00000637667 ABCD1P33897 745 aa21.85■■□□□ 1.09
CLN6-222ENST00000637667 GPC5P78333 572 aa21.85■■□□□ 1.09
CLN6-222ENST00000637667 GTF2BQ00403 316 aa21.85■■□□□ 1.09
CLN6-222ENST00000637667 RESTQ13127 1097 aa21.85■■□□□ 1.09
CLN6-222ENST00000637667 SPECC1Q5M775 1068 aa21.85■■□□□ 1.09
CLN6-222ENST00000637667 PHLDB3Q6NSJ2 640 aa21.85■■□□□ 1.09
CLN6-222ENST00000637667 SLC39A4Q6P5W5 647 aa21.85■■□□□ 1.09
CLN6-222ENST00000637667 AVENQ9NQS1 362 aaPredicted RBP21.85■■□□□ 1.09
CLN6-222ENST00000637667 INSL5Q9Y5Q6 135 aa21.85■■□□□ 1.09
CLN6-222ENST00000637667 NOTCH4Q99466 2003 aa21.84■■□□□ 1.09
CLN6-222ENST00000637667 PROB1E7EW31 1015 aa21.84■■□□□ 1.09
CLN6-222ENST00000637667 M0QZQ0 153 aa21.84■■□□□ 1.09
CLN6-222ENST00000637667 XPOTO43592 962 aaKnown RBP21.84■■□□□ 1.09
CLN6-222ENST00000637667 GFRA3O60609 400 aa21.84■■□□□ 1.09
CLN6-222ENST00000637667 ADRB2P07550 413 aa21.84■■□□□ 1.09
CLN6-222ENST00000637667 PTPN2P17706 415 aa21.84■■□□□ 1.09
CLN6-222ENST00000637667 SYT1P21579 422 aa21.84■■□□□ 1.09
CLN6-222ENST00000637667 GUCY2FP51841 1108 aa21.84■■□□□ 1.09
CLN6-222ENST00000637667 SLC5A9Q2M3M2 681 aa21.84■■□□□ 1.09
CLN6-222ENST00000637667 MAP4K3Q8IVH8 894 aa21.84■■□□□ 1.09
CLN6-222ENST00000637667 KRI1Q8N9T8 703 aaKnown RBP21.84■■□□□ 1.09
CLN6-222ENST00000637667 TSPAN18Q96SJ8 248 aa21.84■■□□□ 1.09
CLN6-222ENST00000637667 GDE1Q9NZC3 331 aa21.84■■□□□ 1.09
CLN6-222ENST00000637667 AFF4Q9UHB7 1163 aaKnown RBP21.84■■□□□ 1.09
CLN6-222ENST00000637667 FBXO2Q9UK22 296 aaPredicted RBP21.84■■□□□ 1.09
CLN6-222ENST00000637667 NBL1P41271 181 aa21.83■■□□□ 1.09
CLN6-222ENST00000637667 AARSP49588 968 aaKnown RBP eCLIP21.83■■□□□ 1.09
CLN6-222ENST00000637667 ADCY1Q08828 1119 aa21.83■■□□□ 1.09
CLN6-222ENST00000637667 FAM173BQ6P4H8 233 aa21.83■■□□□ 1.09
CLN6-222ENST00000637667 KXD1Q9BQD3 176 aa21.83■■□□□ 1.09
CLN6-222ENST00000637667 CORO1BQ9BR76 489 aa21.83■■□□□ 1.09
CLN6-222ENST00000637667 STK17AQ9UEE5 414 aa21.83■■□□□ 1.09
CLN6-222ENST00000637667 CCDC39Q9UFE4 941 aa21.83■■□□□ 1.09
CLN6-222ENST00000637667 CPSF3Q9UKF6 684 aaKnown RBP21.83■■□□□ 1.09
CLN6-222ENST00000637667 MAFFQ9ULX9 164 aa21.83■■□□□ 1.09
CLN6-222ENST00000637667 SRPRBQ9Y5M8 271 aaKnown RBP21.83■■□□□ 1.09
CLN6-222ENST00000637667 OAZ2O95190 189 aa21.82■■□□□ 1.08
CLN6-222ENST00000637667 CPB1P15086 417 aa21.82■■□□□ 1.08
CLN6-222ENST00000637667 CEBPBP17676 345 aa21.82■■□□□ 1.08
CLN6-222ENST00000637667 YWHAHQ04917 246 aaPredicted RBP21.82■■□□□ 1.08
CLN6-222ENST00000637667 ANGPT1Q15389 498 aa21.82■■□□□ 1.08
CLN6-222ENST00000637667 ZC2HC1CQ53FD0 456 aaPredicted RBP21.82■■□□□ 1.08
CLN6-222ENST00000637667 SPATA1Q5VX52 437 aa21.82■■□□□ 1.08
CLN6-222ENST00000637667 CD302Q8IX05 232 aa21.82■■□□□ 1.08
CLN6-222ENST00000637667 FAM212AQ96EL1 285 aa21.82■■□□□ 1.08
CLN6-222ENST00000637667 MCRS1Q96EZ8 462 aa21.82■■□□□ 1.08
CLN6-222ENST00000637667 INTS4Q96HW7 963 aaKnown RBP21.82■■□□□ 1.08
CLN6-222ENST00000637667 ST6GALNAC4Q9H4F1 302 aa21.82■■□□□ 1.08
CLN6-222ENST00000637667 TIMM13Q9Y5L4 95 aaPredicted RBP21.82■■□□□ 1.08
CLN6-222ENST00000637667 PDCD11Q14690 1871 aaKnown RBP21.81■■□□□ 1.08
CLN6-222ENST00000637667 ANKRD63C9JTQ0 380 aa21.81■■□□□ 1.08
CLN6-222ENST00000637667 PRSS36Q5K4E3 855 aa21.81■■□□□ 1.08
CLN6-222ENST00000637667 JADE1Q6IE81 842 aa21.81■■□□□ 1.08
CLN6-222ENST00000637667 DSTYKQ6XUX3 929 aa21.81■■□□□ 1.08
CLN6-222ENST00000637667 DYMQ7RTS9 669 aa21.81■■□□□ 1.08
CLN6-222ENST00000637667 USP37Q86T82 979 aa21.81■■□□□ 1.08
CLN6-222ENST00000637667 SFR1Q86XK3 245 aa21.81■■□□□ 1.08
CLN6-222ENST00000637667 BEST2Q8NFU1 509 aa21.81■■□□□ 1.08
CLN6-222ENST00000637667 SHDQ96IW2 340 aa21.81■■□□□ 1.08
CLN6-222ENST00000637667 CLIC6Q96NY7 704 aa21.81■■□□□ 1.08
CLN6-222ENST00000637667 OXCT2Q9BYC2 517 aaPredicted RBP21.81■■□□□ 1.08
CLN6-222ENST00000637667 ZNF197O14709 1029 aa21.8■■□□□ 1.08
CLN6-222ENST00000637667 PPEF2O14830 753 aa21.8■■□□□ 1.08
CLN6-222ENST00000637667 TXLNAP40222 546 aa21.8■■□□□ 1.08
CLN6-222ENST00000637667 STARD6P59095 220 aa21.8■■□□□ 1.08
CLN6-222ENST00000637667 CEBPZQ03701 1054 aaKnown RBP21.8■■□□□ 1.08
CLN6-222ENST00000637667 RRAGBQ5VZM2 374 aa21.8■■□□□ 1.08
CLN6-222ENST00000637667 SLFN12LQ6IEE8 588 aa21.8■■□□□ 1.08
CLN6-222ENST00000637667 POTEHQ6S545 545 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms