RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 NXF1Q9UBU9 619 aaKnown RBP23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 TSKSQ9UJT2 592 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 HES2Q9Y543 173 aa23.2■■□□□ 1.3
CHRNA7-228ENST00000637519 C17orf102A2RUQ5 167 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 KCNK3O14649 394 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 DUSP11O75319 330 aaKnown RBP23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 KIF4AO95239 1232 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 MYCNP04198 464 aaPredicted RBP23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 ITGB3P05106 788 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 ELNP15502 786 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 GNA15P30679 374 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 RAP1GAPP47736 663 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 GPC5P78333 572 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 RPS6KA1Q15418 735 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 CLEC16AQ2KHT3 1053 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 CCDC181Q5TID7 509 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 MFSD14CQ5VZR4 134 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 SLFN11Q7Z7L1 901 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 PHLDB2Q86SQ0 1253 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 UBR7Q8N806 425 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 ZNF653Q96CK0 615 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 CAPNS2Q96L46 248 aa23.19■■□□□ 1.3
CHRNA7-228ENST00000637519 GZMAP12544 262 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 DARSP14868 501 aaKnown RBP23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 ASPAP45381 313 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 MRPS25P82663 173 aaKnown RBP23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 NOGQ13253 232 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 SGSM1Q2NKQ1 1148 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 LLGL2Q6P1M3 1020 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 NT5DC3Q86UY8 548 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 C7orf31Q8N865 590 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 BTBD6Q96KE9 485 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 ADPGKQ9BRR6 497 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 TMEM110-MUSTN1A8MSY1 372 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 NAA35Q5VZE5 725 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 CYFIP2Q96F07 1278 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 STXBP5LQ9Y2K9 1186 aa23.18■■□□□ 1.3
CHRNA7-228ENST00000637519 CACNB2Q08289 660 aaPredicted RBP23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 CPNE8Q86YQ8 564 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 ACAP3Q96P50 834 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 KATNAL1Q9BW62 490 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 CISHQ9NSE2 258 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 ZNF446Q9NWS9 450 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 SNTG2Q9NY99 539 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 CEP350Q5VT06 3117 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 MROH7Q68CQ1 1323 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 THAP12O43422 761 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 SEC31AO94979 1220 aaKnown RBP23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 ALDH1A1P00352 501 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 UNGP13051 313 aaPredicted RBP23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 CCND3P30281 292 aaPredicted RBP23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 ACAD10Q6JQN1 1059 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 SPATA4Q8NEY3 305 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 CXorf38Q8TB03 319 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 HINFPQ9BQA5 517 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 PDCL3Q9H2J4 239 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 RNF186Q9NXI6 227 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 CNTN6Q9UQ52 1028 aa23.17■■□□□ 1.3
CHRNA7-228ENST00000637519 ZNF132P52740 706 aa23.16■■□□□ 1.3
CHRNA7-228ENST00000637519 ORC1Q13415 861 aa23.16■■□□□ 1.3
CHRNA7-228ENST00000637519 SNX17Q15036 470 aa23.16■■□□□ 1.3
CHRNA7-228ENST00000637519 NXF3Q9H4D5 531 aaKnown RBP23.16■■□□□ 1.3
CHRNA7-228ENST00000637519 TOMM70O94826 608 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 EIF4BP23588 611 aaKnown RBP23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 POLR2BP30876 1174 aaKnown RBP23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 CDH8P55286 799 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 GJA9P57773 515 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 TMEM132DQ14C87 1099 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 WDR72Q3MJ13 1102 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 RHOT2Q8IXI1 618 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 SYCE1Q8N0S2 351 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 TAF4BQ92750 862 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 NUP85Q9BW27 656 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 SDCBP2Q9H190 292 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 ABCB6Q9NP58 842 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 BRD2P25440 801 aaKnown RBP23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 BPIFB4P59827 614 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 MSANTD4Q8NCY6 345 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 ZSWIM1Q9BR11 485 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 APOL6Q9BWW8 343 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 SMYD3Q9H7B4 428 aa23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 RBM12Q9NTZ6 932 aaKnown RBP23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 PIN4Q9Y237 131 aaKnown RBP23.15■■□□□ 1.3
CHRNA7-228ENST00000637519 GRM5P41594 1212 aa23.14■■□□□ 1.29
CHRNA7-228ENST00000637519 DEFB115Q30KQ5 88 aa23.14■■□□□ 1.29
CHRNA7-228ENST00000637519 SLC27A1Q6PCB7 646 aa23.14■■□□□ 1.29
CHRNA7-228ENST00000637519 ZNF572Q7Z3I7 529 aaPredicted RBP23.14■■□□□ 1.29
CHRNA7-228ENST00000637519 ASB7Q9H672 318 aa23.14■■□□□ 1.29
CHRNA7-228ENST00000637519 CNOT8Q9UFF9 292 aaKnown RBP23.14■■□□□ 1.29
CHRNA7-228ENST00000637519 AMFRQ9UKV5 643 aa23.14■■□□□ 1.29
CHRNA7-228ENST00000637519 ZMYND10O75800 440 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 CYP1A1P04798 512 aaPredicted RBP23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 CYP1A2P05177 515 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 HOXC8P31273 242 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 PAFAH1B1P43034 410 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 VSNL1P62760 191 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 SP3Q02447 781 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 MESDQ14696 234 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 NBPF20Q3BBV1 942 aa23.13■■□□□ 1.29
CHRNA7-228ENST00000637519 GLRA4Q5JXX5 417 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms