RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ZSCAN20P17040 1043 aaPredicted RBP16.48■□□□□ 0.23
CLN6-219ENST00000637329 MYL6P60660 151 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 ARHGAP29Q52LW3 1261 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 TRAF7Q6Q0C0 670 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 ZNF571Q7Z3V5 609 aaPredicted RBP16.48■□□□□ 0.23
CLN6-219ENST00000637329 KIAA1328Q86T90 577 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 ANKLE1Q8NAG6 615 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 SMG8Q8ND04 991 aaKnown RBP16.48■□□□□ 0.23
CLN6-219ENST00000637329 BEST2Q8NFU1 509 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 CXorf38Q8TB03 319 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 KAT5Q92993 513 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 FAM84AQ96KN4 292 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 C16orf45Q96MC5 204 aaPredicted RBP16.48■□□□□ 0.23
CLN6-219ENST00000637329 IFIH1Q9BYX4 1025 aaKnown RBP16.48■□□□□ 0.23
CLN6-219ENST00000637329 TRPV6Q9H1D0 765 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 APOBEC3GQ9HC16 384 aaKnown RBP16.48■□□□□ 0.23
CLN6-219ENST00000637329 FAM105AQ9NUU6 356 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 SIX4Q9UIU6 781 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 PADI3Q9ULW8 664 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 UBQLN1Q9UMX0 589 aaKnown RBP16.48■□□□□ 0.23
CLN6-219ENST00000637329 CNTN6Q9UQ52 1028 aa16.48■□□□□ 0.23
CLN6-219ENST00000637329 R3HCC1Q9Y3T6 440 aaKnown RBP16.48■□□□□ 0.23
CLN6-219ENST00000637329 CUL9Q8IWT3 2517 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 KRT86O43790 486 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 CD4P01730 458 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 ITGB3P05106 788 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 PNMA6AP0CW24 399 aaPredicted RBP16.47■□□□□ 0.23
CLN6-219ENST00000637329 P4HA1P13674 534 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 CYP3A5P20815 502 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 CD52P31358 61 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 PDE6CP51160 858 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 BPIFB4P59827 614 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 NFX1Q12986 1120 aaKnown RBP16.47■□□□□ 0.23
CLN6-219ENST00000637329 DSC3Q14574 896 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 ZBTB6Q15916 424 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 C1orf53Q5VUE5 145 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.47■□□□□ 0.23
CLN6-219ENST00000637329 ZNF677Q86XU0 584 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 LRRC52Q8N7C0 313 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 UBR7Q8N806 425 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 EPS8L1Q8TE68 723 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 TATDN2Q93075 761 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 AGO3Q9H9G7 860 aaKnown RBP16.47■□□□□ 0.23
CLN6-219ENST00000637329 MYO1AQ9UBC5 1043 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 NENFQ9UMX5 172 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 NUB1Q9Y5A7 615 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 PCDHB2Q9Y5E7 798 aa16.47■□□□□ 0.23
CLN6-219ENST00000637329 ZNF263O14978 683 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 ZNF623O75123 536 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 SGPL1O95470 568 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 CST3P01034 146 aaPredicted RBP16.46■□□□□ 0.23
CLN6-219ENST00000637329 SELPP16109 830 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 ACO1P21399 889 aaKnown RBP16.46■□□□□ 0.23
CLN6-219ENST00000637329 RBP5P82980 135 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 ZNF667Q5HYK9 610 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 SPOPLQ6IQ16 392 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 LRRC8DQ7L1W4 858 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 ANKRD33Q7Z3H0 272 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 MRPL10Q7Z7H8 261 aaKnown RBP16.46■□□□□ 0.23
CLN6-219ENST00000637329 TTC39CQ8N584 583 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 U2AF1L4Q8WU68 220 aaKnown RBP16.46■□□□□ 0.23
CLN6-219ENST00000637329 BCO2Q9BYV7 579 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 DPP3Q9NY33 737 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 NOCTQ9UK39 431 aaKnown RBP16.46■□□□□ 0.23
CLN6-219ENST00000637329 HES2Q9Y543 173 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 PCDHA13Q9Y5I0 950 aa16.46■□□□□ 0.23
CLN6-219ENST00000637329 A0A087X0T9 212 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 PJA2O43164 708 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 CLSTN1O94985 981 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 KRT19P08727 400 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 FAM228BP0C875 321 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 ITGA4P13612 1032 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 POLR2BP30876 1174 aaKnown RBP16.45■□□□□ 0.22
CLN6-219ENST00000637329 ARHGAP25P42331 645 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 ASPAP45381 313 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 GFPT1Q06210 699 aaPredicted RBP16.45■□□□□ 0.22
CLN6-219ENST00000637329 KIF5AQ12840 1032 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 MYO1EQ12965 1108 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 NAB2Q15742 525 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 OLIG1Q8TAK6 271 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 ZNF560Q96MR9 790 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 ARID3AQ99856 593 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLN6-219ENST00000637329 FTHL17Q9BXU8 183 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 UBN1Q9NPG3 1134 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 SLC38A7Q9NVC3 462 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 PARP2Q9UGN5 583 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 ADAMTS1Q9UHI8 967 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 NAGPAQ9UK23 515 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 INTUQ9ULD6 942 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 GIT1Q9Y2X7 761 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 UMODL1Q5DID0 1318 aa16.45■□□□□ 0.22
CLN6-219ENST00000637329 A0A0U1RQF3 1178 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 KIF5CO60282 957 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 PARNO95453 639 aaKnown RBP16.44■□□□□ 0.22
CLN6-219ENST00000637329 COL6A1P12109 1028 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 KRT5P13647 590 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 TNNT1P13805 278 aa16.44■□□□□ 0.22
CLN6-219ENST00000637329 ATF7P17544 494 aaPredicted RBP16.44■□□□□ 0.22
CLN6-219ENST00000637329 AKAP5P24588 427 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms