RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 TLE2Q04725 743 aa22.64■■□□□ 1.22
CLN8-213ENST00000637156 TRIM60Q495X7 471 aa22.64■■□□□ 1.22
CLN8-213ENST00000637156 AGMOQ6ZNB7 445 aa22.64■■□□□ 1.22
CLN8-213ENST00000637156 LPPQ93052 612 aa22.64■■□□□ 1.22
CLN8-213ENST00000637156 DEF6Q9H4E7 631 aa22.64■■□□□ 1.22
CLN8-213ENST00000637156 AGAP1Q9UPQ3 857 aa22.64■■□□□ 1.22
CLN8-213ENST00000637156 PITPNM1O00562 1244 aa22.64■■□□□ 1.21
CLN8-213ENST00000637156 CYP26A1O43174 497 aa22.64■■□□□ 1.21
CLN8-213ENST00000637156 ZSCAN12O43309 604 aa22.64■■□□□ 1.21
CLN8-213ENST00000637156 ITGA4P13612 1032 aa22.64■■□□□ 1.21
CLN8-213ENST00000637156 POLR2BP30876 1174 aaKnown RBP22.64■■□□□ 1.21
CLN8-213ENST00000637156 AFF1P51825 1210 aaKnown RBP22.64■■□□□ 1.21
CLN8-213ENST00000637156 GFPT1Q06210 699 aaPredicted RBP22.64■■□□□ 1.21
CLN8-213ENST00000637156 ANKLE1Q8NAG6 615 aa22.64■■□□□ 1.21
CLN8-213ENST00000637156 ZFP42Q96MM3 310 aa22.64■■□□□ 1.21
CLN8-213ENST00000637156 ACP6Q9NPH0 428 aa22.64■■□□□ 1.21
CLN8-213ENST00000637156 TUBGCP4Q9UGJ1 667 aa22.64■■□□□ 1.21
CLN8-213ENST00000637156 ITGA11Q9UKX5 1188 aa22.64■■□□□ 1.21
CLN8-213ENST00000637156 A0A087X0T9 212 aa22.63■■□□□ 1.21
CLN8-213ENST00000637156 TLR3O15455 904 aaKnown RBP22.63■■□□□ 1.21
CLN8-213ENST00000637156 FAM228BP0C875 321 aa22.63■■□□□ 1.21
CLN8-213ENST00000637156 RBP5P82980 135 aa22.63■■□□□ 1.21
CLN8-213ENST00000637156 ZNF699Q32M78 642 aa22.63■■□□□ 1.21
CLN8-213ENST00000637156 FMNL3Q8IVF7 1028 aa22.63■■□□□ 1.21
CLN8-213ENST00000637156 TAF4BQ92750 862 aa22.63■■□□□ 1.21
CLN8-213ENST00000637156 JAKMIP2Q96AA8 810 aa22.63■■□□□ 1.21
CLN8-213ENST00000637156 PAWRQ96IZ0 340 aaKnown RBP22.63■■□□□ 1.21
CLN8-213ENST00000637156 SYT11Q9BT88 431 aa22.63■■□□□ 1.21
CLN8-213ENST00000637156 DCDC2CA8MYV0 355 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 PTGESO14684 152 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 ABL1P00519 1130 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 CCDC172P0C7W6 258 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 ATF7P17544 494 aaPredicted RBP22.62■■□□□ 1.21
CLN8-213ENST00000637156 WDR72Q3MJ13 1102 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 OLIG1Q8TAK6 271 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 TSPAN18Q96SJ8 248 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 VRTNQ9H8Y1 702 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 RGS18Q9NS28 235 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 TBXAS1P24557 533 aaPredicted RBP22.62■■□□□ 1.21
CLN8-213ENST00000637156 SLC18A3Q16572 532 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 SLC47A2Q86VL8 602 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 HPDLQ96IR7 371 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 GAD1Q99259 594 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.62■■□□□ 1.21
CLN8-213ENST00000637156 MIOSQ9NXC5 875 aa22.62■■□□□ 1.21
CLN8-213ENST00000637156 NXF1Q9UBU9 619 aaKnown RBP22.62■■□□□ 1.21
CLN8-213ENST00000637156 UBQLN1Q9UMX0 589 aaKnown RBP22.62■■□□□ 1.21
CLN8-213ENST00000637156 CITO14578 2027 aa22.61■■□□□ 1.21
CLN8-213ENST00000637156 CLSTN1O94985 981 aa22.61■■□□□ 1.21
CLN8-213ENST00000637156 ATICP31939 592 aa22.61■■□□□ 1.21
CLN8-213ENST00000637156 ASPAP45381 313 aa22.61■■□□□ 1.21
CLN8-213ENST00000637156 RAB27AP51159 221 aa22.61■■□□□ 1.21
CLN8-213ENST00000637156 KRT83P78385 493 aa22.61■■□□□ 1.21
CLN8-213ENST00000637156 SOX4Q06945 474 aaPredicted RBP22.61■■□□□ 1.21
CLN8-213ENST00000637156 BEST2Q8NFU1 509 aa22.61■■□□□ 1.21
CLN8-213ENST00000637156 NIF3L1Q9GZT8 377 aa22.61■■□□□ 1.21
CLN8-213ENST00000637156 POLIQ9UNA4 740 aa22.61■■□□□ 1.21
CLN8-213ENST00000637156 TFR2Q9UP52 801 aa22.61■■□□□ 1.21
CLN8-213ENST00000637156 CNTN6Q9UQ52 1028 aa22.61■■□□□ 1.21
CLN8-213ENST00000637156 GIT1Q9Y2X7 761 aa22.61■■□□□ 1.21
CLN8-213ENST00000637156 KIAA0100Q14667 2235 aaKnown RBP22.6■■□□□ 1.21
CLN8-213ENST00000637156 PPEF2O14830 753 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 CCP110O43303 1012 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 OFD1O75665 1012 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 WEE2P0C1S8 567 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 MLH1P40692 756 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 HACE1Q8IYU2 909 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 UBR7Q8N806 425 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 DBF4BQ8NFT6 615 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 LINC01599Q8WXQ3 324 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 PPP1R10Q96QC0 940 aaKnown RBP22.6■■□□□ 1.21
CLN8-213ENST00000637156 HIPK3Q9H422 1215 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 TRIP11Q15643 1979 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 RCCD1A6NED2 376 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 ARL5CA6NH57 179 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 C9IYK1 514 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 DDX3XO00571 662 aaKnown RBP eCLIP22.6■■□□□ 1.215e-9■■■■□ 23.9
CLN8-213ENST00000637156 KRT5P13647 590 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 FAM189BP81408 668 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 SPA17Q15506 151 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 PLEKHG4Q58EX7 1191 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 ZNF667Q5HYK9 610 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 ZNF598Q86UK7 904 aaKnown RBP22.6■■□□□ 1.21
CLN8-213ENST00000637156 ECHDC2Q86YB7 292 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 SLC30A5Q8TAD4 765 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 SCLYQ96I15 445 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 TMEM106CQ9BVX2 250 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 C11orf49Q9H6J7 331 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 R3HCC1Q9Y3T6 440 aaKnown RBP22.6■■□□□ 1.21
CLN8-213ENST00000637156 PCDHA13Q9Y5I0 950 aa22.6■■□□□ 1.21
CLN8-213ENST00000637156 ANO9A1A5B4 782 aa22.59■■□□□ 1.21
CLN8-213ENST00000637156 PIRO00625 290 aa22.59■■□□□ 1.21
CLN8-213ENST00000637156 STAU1O95793 577 aaKnown RBP22.59■■□□□ 1.21
CLN8-213ENST00000637156 CYP11B1P15538 503 aa22.59■■□□□ 1.21
CLN8-213ENST00000637156 C9orf57Q5W0N0 161 aa22.59■■□□□ 1.21
CLN8-213ENST00000637156 NYAP1Q6ZVC0 841 aa22.59■■□□□ 1.21
CLN8-213ENST00000637156 NOP9Q86U38 636 aaKnown RBP22.59■■□□□ 1.21
CLN8-213ENST00000637156 RNF169Q8NCN4 708 aa22.59■■□□□ 1.21
CLN8-213ENST00000637156 EPS8L1Q8TE68 723 aa22.59■■□□□ 1.21
CLN8-213ENST00000637156 SLC20A1Q8WUM9 679 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms