RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 H7C4K7 107 aa16.11■□□□□ 0.17
PNKP-218ENST00000625299 GDF9O60383 454 aa16.11■□□□□ 0.17
PNKP-218ENST00000625299 LRP3O75074 770 aa16.11■□□□□ 0.17
PNKP-218ENST00000625299 MCM7P33993 719 aa16.11■□□□□ 0.17
PNKP-218ENST00000625299 ZNF568Q3ZCX4 644 aa16.11■□□□□ 0.17
PNKP-218ENST00000625299 CTXN3Q4LDR2 81 aa16.11■□□□□ 0.17
PNKP-218ENST00000625299 ERMNQ8TAM6 284 aa16.11■□□□□ 0.17
PNKP-218ENST00000625299 CSGALNACT1Q8TDX6 532 aa16.11■□□□□ 0.17
PNKP-218ENST00000625299 ASAH2Q9NR71 780 aa16.11■□□□□ 0.17
PNKP-218ENST00000625299 TOPORSQ9NS56 1045 aaPredicted RBP16.11■□□□□ 0.17
PNKP-218ENST00000625299 RBM12Q9NTZ6 932 aaKnown RBP16.11■□□□□ 0.17
PNKP-218ENST00000625299 FBXL5Q9UKA1 691 aa16.11■□□□□ 0.17
PNKP-218ENST00000625299 NCANO14594 1321 aa16.11■□□□□ 0.17
PNKP-218ENST00000625299 CFAP47Q6ZTR5 3102 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 SLC38A8A6NNN8 435 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 HEPACAM2A8MVW5 462 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 SYN3O14994 580 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 HRO43593 1189 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 MICAL2O94851 1124 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 CHRNB1P11230 501 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 FDPSP14324 419 aaKnown RBP16.1■□□□□ 0.17
PNKP-218ENST00000625299 CPB1P15086 417 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 SOX9P48436 509 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 KPNA1P52294 538 aaPredicted RBP16.1■□□□□ 0.17
PNKP-218ENST00000625299 EFNA5P52803 228 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 TRIM29Q14134 588 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 LRRC32Q14392 662 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 GAS6Q14393 721 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 TEAD2Q15562 447 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 CSRP2Q16527 193 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 ZNF280DQ6N043 979 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 MAMSTRQ6ZN01 415 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 CEP68Q76N32 757 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 YAF2Q8IY57 180 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 NECAB1Q8N987 351 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 POLR3CQ9BUI4 534 aaPredicted RBP16.1■□□□□ 0.17
PNKP-218ENST00000625299 TRPV5Q9NQA5 729 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 SLC38A7Q9NVC3 462 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 CEP72Q9P209 647 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 USP24Q9UPU5 2620 aa16.1■□□□□ 0.17
PNKP-218ENST00000625299 CITO14578 2027 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 K7ERI5 159 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 MOSPD3O75425 235 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 HARSP12081 509 aaKnown RBP16.09■□□□□ 0.17
PNKP-218ENST00000625299 MCM4P33991 863 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 GRM5P41594 1212 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 TPGS2Q68CL5 300 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 IL31Q6EBC2 164 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 Q6ZS52 159 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 LONP2Q86WA8 852 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 GPIHBP1Q8IV16 184 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 MFSD6LQ8IWD5 586 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 SPEM1Q8N4L4 309 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 TTC8Q8TAM2 541 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 C18orf25Q96B23 403 aaPredicted RBP16.09■□□□□ 0.17
PNKP-218ENST00000625299 ZMAT2Q96NC0 199 aaKnown RBP16.09■□□□□ 0.17
PNKP-218ENST00000625299 CDT1Q9H211 546 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 TNFSF13BQ9Y275 285 aa16.09■□□□□ 0.17
PNKP-218ENST00000625299 CCDC169A6NNP5 214 aa16.08■□□□□ 0.16
PNKP-218ENST00000625299 EPB41L2O43491 1005 aaKnown RBP16.08■□□□□ 0.16
PNKP-218ENST00000625299 PTGDRQ13258 359 aa16.08■□□□□ 0.16
PNKP-218ENST00000625299 AASDHQ4L235 1098 aaPredicted RBP16.08■□□□□ 0.16
PNKP-218ENST00000625299 FAM200AQ8TCP9 573 aa16.08■□□□□ 0.16
PNKP-218ENST00000625299 KIFAP3Q92845 792 aa16.08■□□□□ 0.16
PNKP-218ENST00000625299 BHMT2Q9H2M3 363 aa16.08■□□□□ 0.16
PNKP-218ENST00000625299 AFF4Q9UHB7 1163 aaKnown RBP16.08■□□□□ 0.16
PNKP-218ENST00000625299 CACNA1GO43497 2377 aa16.08■□□□□ 0.16
PNKP-218ENST00000625299 SDK1Q7Z5N4 2213 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 CNOT1A5YKK6 2376 aaKnown RBP16.07■□□□□ 0.16
PNKP-218ENST00000625299 A0A1W2PRU2 124 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 ARNTLO00327 626 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 RPA1P27694 616 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 CNR2P34972 360 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 MRPL58Q14197 206 aaKnown RBP16.07■□□□□ 0.16
PNKP-218ENST00000625299 CCDC6Q16204 474 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 RNF19BQ6ZMZ0 732 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 FAM160A2Q8N612 972 aaPredicted RBP16.07■□□□□ 0.16
PNKP-218ENST00000625299 LEMD2Q8NC56 503 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 SHKBP1Q8TBC3 707 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 DDX12PQ92771 950 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 RSPRY1Q96DX4 576 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 ACAP3Q96P50 834 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 PGLYRP2Q96PD5 576 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 ACO2Q99798 780 aaKnown RBP16.07■□□□□ 0.16
PNKP-218ENST00000625299 TCHPQ9BT92 498 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 YIPF1Q9Y548 306 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 PHLPP2Q6ZVD8 1323 aa16.07■□□□□ 0.16
PNKP-218ENST00000625299 K7ESF4 209 aa16.06■□□□□ 0.16
PNKP-218ENST00000625299 JAK2O60674 1132 aa16.06■□□□□ 0.16
PNKP-218ENST00000625299 LARGE1O95461 756 aa16.06■□□□□ 0.16
PNKP-218ENST00000625299 OR52Z1P0C646 297 aa16.06■□□□□ 0.16
PNKP-218ENST00000625299 MARCKSP29966 332 aaPredicted RBP16.06■□□□□ 0.16
PNKP-218ENST00000625299 HOXC13P31276 330 aa16.06■□□□□ 0.16
PNKP-218ENST00000625299 RPL9P32969 192 aaKnown RBP16.06■□□□□ 0.16
PNKP-218ENST00000625299 CCT6AP40227 531 aaKnown RBP16.06■□□□□ 0.16
PNKP-218ENST00000625299 PEX3P56589 373 aa16.06■□□□□ 0.16
PNKP-218ENST00000625299 GUCY1B3Q02153 619 aa16.06■□□□□ 0.16
PNKP-218ENST00000625299 XKR4Q5GH76 650 aa16.06■□□□□ 0.16
PNKP-218ENST00000625299 HAUS3Q68CZ6 603 aa16.06■□□□□ 0.16
PNKP-218ENST00000625299 TXNDC11Q6PKC3 985 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms