RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 TMC5Q6UXY8 1006 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 UNC13DQ70J99 1090 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 BEST2Q8NFU1 509 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 LEO1Q8WVC0 666 aaPredicted RBP13.51□□□□□ -0.25
LINC00963-217ENST00000624009 POMGNT1Q8WZA1 660 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 KHSRPQ92945 711 aaKnown RBP eCLIP13.51□□□□□ -0.252e-13■■■■■ 28.4
LINC00963-217ENST00000624009 RPGRIP1Q96KN7 1286 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 PRKD2Q9BZL6 878 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 WDR6Q9NNW5 1121 aaKnown RBP13.51□□□□□ -0.25
LINC00963-217ENST00000624009 CGNQ9P2M7 1197 aaKnown RBP13.51□□□□□ -0.25
LINC00963-217ENST00000624009 PCDHB8Q9UN66 801 aa13.51□□□□□ -0.25
LINC00963-217ENST00000624009 F5P12259 2224 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 CCDC195A0A1B0GUA6 201 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 A0A1W2PQ27 194 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 A0A1W2PQ64 194 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 A0A1W2PQD8 194 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 ABLIM3O94929 683 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 OAZ2O95190 189 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 RPL17P18621 184 aaKnown RBP13.5□□□□□ -0.25
LINC00963-217ENST00000624009 MCM4P33991 863 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 CASP5P51878 434 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 ASIC1P78348 528 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 NUCB2P80303 420 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 KCNA1Q09470 495 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 TMEM132DQ14C87 1099 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 VARS2Q5ST30 1063 aaKnown RBP13.5□□□□□ -0.25
LINC00963-217ENST00000624009 ZBTB41Q5SVQ8 909 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 EPM2AIP1Q7L775 607 aaPredicted RBP13.5□□□□□ -0.25
LINC00963-217ENST00000624009 PALB2Q86YC2 1186 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 CEP57L1Q8IYX8 460 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 SYCP3Q8IZU3 236 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 C12orf76Q8N812 135 aaPredicted RBP13.5□□□□□ -0.25
LINC00963-217ENST00000624009 TDRD5Q8NAT2 981 aaKnown RBP13.5□□□□□ -0.25
LINC00963-217ENST00000624009 ZNF461Q8TAF7 563 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 EDAQ92838 391 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 ZNF707Q96C28 371 aaPredicted RBP13.5□□□□□ -0.25
LINC00963-217ENST00000624009 ACSF2Q96CM8 615 aaPredicted RBP13.5□□□□□ -0.25
LINC00963-217ENST00000624009 APOL5Q9BWW9 433 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 TUBGCP4Q9UGJ1 667 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 HPSEQ9Y251 543 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 ARIH1Q9Y4X5 557 aaPredicted RBP13.5□□□□□ -0.25
LINC00963-217ENST00000624009 ZFP37Q9Y6Q3 630 aaPredicted RBP13.5□□□□□ -0.25
LINC00963-217ENST00000624009 TSC2P49815 1807 aa13.5□□□□□ -0.25
LINC00963-217ENST00000624009 ANO9A1A5B4 782 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 PIRO00625 290 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 EXTL3O43909 919 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 XYLBO75191 536 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 MYBP10242 640 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 TYMPP19971 482 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 OR1D2P34982 312 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 BRCC3P46736 316 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 ACOT2P49753 483 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 BMT2Q1RMZ1 405 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 FOXD4L6Q3SYB3 417 aaPredicted RBP13.49□□□□□ -0.25
LINC00963-217ENST00000624009 FAM26FQ5R3K3 315 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 JADE1Q6IE81 842 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 ZNF280DQ6N043 979 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 CRELD2Q6UXH1 353 aaPredicted RBP13.49□□□□□ -0.25
LINC00963-217ENST00000624009 FOXD4L3Q6VB84 417 aaPredicted RBP13.49□□□□□ -0.25
LINC00963-217ENST00000624009 BRSK2Q8IWQ3 736 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 ZNF507Q8TCN5 953 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 TMEM174Q8WUU8 243 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 SMG7Q92540 1137 aaKnown RBP13.49□□□□□ -0.25
LINC00963-217ENST00000624009 NXPE3Q969Y0 559 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 KIAA1586Q9HCI6 787 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 C11orf16Q9NQ32 467 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.49□□□□□ -0.253e-8■■■■□ 21.6
LINC00963-217ENST00000624009 TBC1D7Q9P0N9 293 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 MUTYHQ9UIF7 546 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 CDY1Q9Y6F8 540 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 WDFY4Q6ZS81 3184 aa13.49□□□□□ -0.25
LINC00963-217ENST00000624009 CLUHO75153 1309 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 C2CD4DB7Z1M9 353 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 TISP43B9A030 160 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 ACTN4O43707 911 aaKnown RBP13.48□□□□□ -0.25
LINC00963-217ENST00000624009 ATF2P15336 505 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 PNPLA4P41247 253 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 LILRA4P59901 499 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 PSMD2Q13200 908 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 SURF1Q15526 300 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 PTPN21Q16825 1174 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 BMP8AQ7Z5Y6 402 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 TCEAL8Q8IYN2 117 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 UBALD2Q8IYN6 164 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 CACTINQ8WUQ7 758 aaKnown RBP13.48□□□□□ -0.25
LINC00963-217ENST00000624009 LRFN3Q9BTN0 628 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 AVENQ9NQS1 362 aaPredicted RBP13.48□□□□□ -0.25
LINC00963-217ENST00000624009 EPS15L1Q9UBC2 864 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 FBXL5Q9UKA1 691 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 DSEQ9UL01 958 aa13.48□□□□□ -0.25
LINC00963-217ENST00000624009 OR6C75A6NL08 312 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 ADAM12O43184 909 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 RFPL2O75678 378 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 PRPF6O94906 941 aaKnown RBP13.47□□□□□ -0.25
LINC00963-217ENST00000624009 CYP11A1P05108 521 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 C8AP07357 584 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 NFICP08651 508 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 PFKFB1P16118 471 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms