RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 BPIP17213 487 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 FXR1P51114 621 aaKnown RBP eCLIP9.19□□□□□ -0.94
CDKL5-206ENST00000623610 HTD2P86397 168 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 PWP1Q13610 501 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 CCDC85BQ15834 202 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-206ENST00000623610 LONRF2Q1L5Z9 754 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 LETM2Q2VYF4 491 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 FYB2Q5VWT5 728 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 DCLRE1AQ6PJP8 1040 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 CEP128Q6ZU80 1094 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 SRGAP1Q7Z6B7 1085 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 MTDHQ86UE4 582 aaKnown RBP9.19□□□□□ -0.94
CDKL5-206ENST00000623610 LSRQ86X29 649 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-206ENST00000623610 CACNA2D3Q8IZS8 1091 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 ANKS4BQ8N8V4 417 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 FAM71DQ8N9W8 422 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 C1orf162Q8NEQ5 155 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-206ENST00000623610 OR6P1Q8NGX9 317 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 LILRB4Q8NHJ6 448 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 RUBCNQ92622 972 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 INTS12Q96CB8 462 aaKnown RBP9.19□□□□□ -0.94
CDKL5-206ENST00000623610 SLC4A9Q96Q91 983 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 CORO1BQ9BR76 489 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 RNF38Q9H0F5 515 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 MAGEH1Q9H213 219 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 NRDE2Q9H7Z3 1164 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 RPRD1BQ9NQG5 326 aaKnown RBP9.19□□□□□ -0.94
CDKL5-206ENST00000623610 TIMM22Q9Y584 194 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 TNPO3Q9Y5L0 923 aaKnown RBP9.19□□□□□ -0.94
CDKL5-206ENST00000623610 MYO3BQ8WXR4 1341 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 NUDT19A8MXV4 375 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 UPK3BL1B0FP48 263 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 UPK3BL2E5RIL1 263 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 PGM3O95394 542 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 IL2RBP14784 551 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 HLA-DPA1P20036 260 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 YY1P25490 414 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 PPP5CP53041 499 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 RBP5P82980 135 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 HHIPL2Q6UWX4 724 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 LEKR1Q6ZMV7 388 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 RUFY4Q6ZNE9 571 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 LRRC69Q6ZNQ3 347 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 CPOQ8IVL8 374 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 ADAM32Q8TC27 787 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 SLC35B4Q969S0 331 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 ZNF669Q96BR6 464 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-206ENST00000623610 CRBNQ96SW2 442 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 GAL3ST1Q99999 423 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 KRT23Q9C075 422 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 UNC93B1Q9H1C4 597 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 RASSF4Q9H2L5 321 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 DMRT3Q9NQL9 472 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 TUBA8Q9NY65 449 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-206ENST00000623610 EXTL2Q9UBQ6 330 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 FBXO40Q9UH90 709 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 ASB3Q9Y575 518 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 CTAGE15A4D2H0 777 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 ENO4A6NNW6 628 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 RSPH10B2B2RC85 870 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 GOLGA6L19H0YKK7 550 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 TTI1O43156 1089 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 PROM1O43490 865 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 EXTL3O43909 919 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 FLOT1O75955 427 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 RSPH10BP0C881 870 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 CTAGE8P0CG41 777 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 ADSLP30566 484 aaPredicted RBP9.18□□□□□ -0.94
CDKL5-206ENST00000623610 RFC4P35249 363 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 DPP6P42658 865 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 ABCG1P45844 678 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 TRIM32Q13049 653 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 FBXO48Q5FWF7 155 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 FDX2Q6P4F2 183 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 MROH5Q6ZUA9 1318 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 SPATA21Q7Z572 469 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 CTAGE6Q86UF2 777 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 CD302Q8IX05 232 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 CTAGE4Q8IX94 777 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 AHI1Q8N157 1196 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 MARCH10Q8NA82 808 aaPredicted RBP9.18□□□□□ -0.94
CDKL5-206ENST00000623610 DENND6BQ8NEG7 585 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 ARMC2Q8NEN0 867 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 MIPOL1Q8TD10 442 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 CCDC74AQ96AQ1 378 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 CCDC43Q96MW1 224 aaKnown RBP9.18□□□□□ -0.94
CDKL5-206ENST00000623610 NUP88Q99567 741 aaPredicted RBP9.18□□□□□ -0.94
CDKL5-206ENST00000623610 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDKL5-206ENST00000623610 C1orf21Q9H246 121 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 USP40Q9NVE5 1235 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 HMG20BQ9P0W2 317 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 MTRF1LQ9UGC7 380 aaKnown RBP9.18□□□□□ -0.94
CDKL5-206ENST00000623610 ATPIF1Q9UII2 106 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 BAG5Q9UL15 447 aa9.18□□□□□ -0.94
CDKL5-206ENST00000623610 MAGED2Q9UNF1 606 aaPredicted RBP9.18□□□□□ -0.94
CDKL5-206ENST00000623610 YKT6O15498 198 aa9.17□□□□□ -0.94
CDKL5-206ENST00000623610 CPNE3O75131 537 aaKnown RBP9.17□□□□□ -0.94
CDKL5-206ENST00000623610 PF4P02776 101 aa9.17□□□□□ -0.94
CDKL5-206ENST00000623610 DLATP10515 647 aaKnown RBP9.17□□□□□ -0.94
CDKL5-206ENST00000623610 EVI2BP34910 448 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms