RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 KXD1Q9BQD3 176 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 CCDC94Q9BW85 323 aaPredicted RBP12.52□□□□□ -0.41
CPNE3-210ENST00000621245 RAB34Q9BZG1 259 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 FOXQ1Q9C009 403 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 IKZF4Q9H2S9 585 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 CNTN3Q9P232 1028 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 CDH7Q9ULB5 785 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 OBSL1O75147 1896 aa12.52□□□□□ -0.41
CPNE3-210ENST00000621245 DENND4CQ5VZ89 1909 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 PROB1E7EW31 1015 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 PPEF2O14830 753 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 TBC1D4O60343 1298 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 VNN2O95498 520 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 HNRNPA1P09651 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
CPNE3-210ENST00000621245 PLS3P13797 630 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 HOXA9P31269 272 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 CLCN1P35523 988 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 NBL1P41271 181 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 CCR2P41597 374 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 YARSP54577 528 aaKnown RBP12.51□□□□□ -0.41
CPNE3-210ENST00000621245 ARPP19P56211 112 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 GPC5P78333 572 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 ELAVL2Q12926 359 aaKnown RBP12.51□□□□□ -0.41
CPNE3-210ENST00000621245 NOLC1Q14978 699 aaKnown RBP eCLIP12.51□□□□□ -0.41
CPNE3-210ENST00000621245 ANGPT1Q15389 498 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 RILPL1Q5EBL4 403 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 SPECC1Q5M775 1068 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 TCEAL4Q96EI5 215 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 UROC1Q96N76 676 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 REEP2Q9BRK0 252 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 PLA2G2FQ9BZM2 168 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 ARHGEF3Q9NR81 526 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 BLOC1S4Q9NUP1 217 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.51□□□□□ -0.41
CPNE3-210ENST00000621245 DLGAP2Q9P1A6 1054 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 WNT16Q9UBV4 365 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 BACE2Q9Y5Z0 518 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 NCANO14594 1321 aa12.51□□□□□ -0.41
CPNE3-210ENST00000621245 NUP210Q8TEM1 1887 aaPredicted RBP12.51□□□□□ -0.41
CPNE3-210ENST00000621245 OTOGLQ3ZCN5 2332 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 TISP43B9A030 160 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 H3BQV1 296 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 ST18O60284 1047 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 FAM189A1O60320 539 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 NCKAP1LP55160 1127 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 DHX8Q14562 1220 aaKnown RBP12.5□□□□□ -0.41
CPNE3-210ENST00000621245 SLC8B1Q6J4K2 584 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 SLC39A4Q6P5W5 647 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 SPIRE2Q8WWL2 714 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
CPNE3-210ENST00000621245 ACAP3Q96P50 834 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 NTPCRQ9BSD7 190 aaKnown RBP12.5□□□□□ -0.41
CPNE3-210ENST00000621245 TCHPQ9BT92 498 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 SLC2A4RGQ9NR83 387 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 TOPORSQ9NS56 1045 aaPredicted RBP12.5□□□□□ -0.41
CPNE3-210ENST00000621245 FBXL5Q9UKA1 691 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 PCDHGA4Q9Y5G9 962 aa12.5□□□□□ -0.41
CPNE3-210ENST00000621245 GPR179Q6PRD1 2367 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 TOM1L1O75674 476 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 ABLIM3O94929 683 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 RHOP08100 348 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 POU2F2P09086 479 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 PLCG1P19174 1290 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 FCARP24071 287 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 MCL1Q07820 350 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 SNW1Q13573 536 aaKnown RBP12.49□□□□□ -0.41
CPNE3-210ENST00000621245 MRPL58Q14197 206 aaKnown RBP12.49□□□□□ -0.41
CPNE3-210ENST00000621245 MCM6Q14566 821 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 KARSQ15046 597 aaKnown RBP12.49□□□□□ -0.41
CPNE3-210ENST00000621245 PABPC1LQ4VXU2 614 aaKnown RBP12.49□□□□□ -0.41
CPNE3-210ENST00000621245 PRSS36Q5K4E3 855 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 PDXDC1Q6P996 788 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 ANKS3Q6ZW76 656 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 USP49Q70CQ1 688 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 GPBP1Q86WP2 473 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 MCRS1Q96EZ8 462 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 SUSD3Q96L08 255 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 TBC1D32Q96NH3 1257 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 FIZ1Q96SL8 496 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 CRISPLD1Q9H336 500 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 MTF2Q9Y483 593 aaPredicted RBP12.49□□□□□ -0.41
CPNE3-210ENST00000621245 RBM19Q9Y4C8 960 aaKnown RBP12.49□□□□□ -0.41
CPNE3-210ENST00000621245 TIMM13Q9Y5L4 95 aaPredicted RBP12.49□□□□□ -0.41
CPNE3-210ENST00000621245 R4GN57 208 aa12.49□□□□□ -0.41
CPNE3-210ENST00000621245 F5P12259 2224 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 LAMA1P25391 3075 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 TTC26A0AVF1 554 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 ARHGEF37A1IGU5 675 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 SHISA7A6NL88 538 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 XYLBO75191 536 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 MOSPD3O75425 235 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 OR4Q2P0C623 313 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 CD72P21854 359 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 CDR1P51861 262 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 STRN3Q13033 797 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 ENOX2Q16206 610 aaKnown RBP12.48□□□□□ -0.41
CPNE3-210ENST00000621245 ZPBP2Q6X784 338 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 PJA1Q8NG27 643 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 NXPE3Q969Y0 559 aa12.48□□□□□ -0.41
CPNE3-210ENST00000621245 CDK5RAP3Q96JB5 506 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms