RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 LPIN1Q14693 890 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 PPP2R5EQ16537 467 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 PHLDB2Q86SQ0 1253 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 CRAMP1Q96RY5 1269 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 RETREG1Q9H6L5 497 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 DMTF1Q9Y222 760 aa10.98□□□□□ -0.65
VPS11-207ENST00000620429 ABCB11O95342 1321 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 MYMKA6NI61 221 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 F8W8V4 182 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 GOLGA8TH3BQL2 631 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 TLR2O60603 784 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 ZWINTO95229 277 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 GOLGA8HP0CJ92 632 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 ITGA4P13612 1032 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 POLR2FP61218 127 aaKnown RBP10.97□□□□□ -0.65
VPS11-207ENST00000620429 STRN3Q13033 797 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 LRRC41Q15345 812 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 SLC45A4Q5BKX6 768 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 FAM83BQ5T0W9 1011 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 ZDHHC24Q6UX98 284 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 ARHGEF18Q6ZSZ5 1173 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 GUF1Q8N442 669 aaKnown RBP10.97□□□□□ -0.65
VPS11-207ENST00000620429 DAGLBQ8NCG7 672 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 TGFBRAP1Q8WUH2 860 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 SYN2Q92777 582 aaPredicted RBP10.97□□□□□ -0.65
VPS11-207ENST00000620429 SERPINB12Q96P63 405 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 TUT1Q9H6E5 874 aaKnown RBP10.97□□□□□ -0.65
VPS11-207ENST00000620429 BARHL2Q9NY43 387 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 TTC7AQ9ULT0 858 aaPredicted RBP10.97□□□□□ -0.65
VPS11-207ENST00000620429 SSX2IPQ9Y2D8 614 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 WASF2Q9Y6W5 498 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 USP17L3A6NCW0 530 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 USP17L4A6NCW7 530 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 FAM187AA6NFU0 413 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 SPECC1L-ADORA2AF8WAN1 911 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 RIPK2O43353 540 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 CYP2C9P11712 490 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 SLCO1A2P46721 670 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 RHBDL3P58872 404 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 LRRC63Q05C16 580 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 PPP2R5CQ13362 524 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 MED21Q13503 144 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 BORAQ6PGQ7 559 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 LRRC55Q6ZSA7 311 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 USP17L1Q7RTZ2 530 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 MAPKAPK5Q8IW41 473 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 METTL13Q8N6R0 699 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 TSG101Q99816 390 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 TRIM51Q9BSJ1 452 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 TUBB6Q9BUF5 446 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 LSM14BQ9BX40 385 aaKnown RBP10.97□□□□□ -0.65
VPS11-207ENST00000620429 PACSIN1Q9BY11 444 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 SEMA4AQ9H3S1 761 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 IL17RBQ9NRM6 502 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 CEP72Q9P209 647 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 PPP1R9AQ9ULJ8 1098 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 ATP6V0A2Q9Y487 856 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 TRIM17Q9Y577 477 aa10.97□□□□□ -0.65
VPS11-207ENST00000620429 CYTH3O43739 400 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 CCR3P51677 355 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 PPIDQ08752 370 aaKnown RBP10.96□□□□□ -0.65
VPS11-207ENST00000620429 RAPGEF1Q13905 1077 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 GRM4Q14833 912 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 NONOQ15233 471 aaKnown RBP eCLIP10.96□□□□□ -0.65
VPS11-207ENST00000620429 PTPROQ16827 1216 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 ZNF423Q2M1K9 1284 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 SLC35G1Q2M3R5 365 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 CTC1Q2NKJ3 1217 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 DHRS4L2Q6PKH6 230 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 LRRC49Q8IUZ0 686 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 PPP1R14CQ8TAE6 165 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 STARD8Q92502 1023 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 CDK5RAP3Q96JB5 506 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 HEPHQ9BQS7 1158 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 ARPP21Q9UBL0 812 aaPredicted RBP10.96□□□□□ -0.65
VPS11-207ENST00000620429 ADAMTS1Q9UHI8 967 aa10.96□□□□□ -0.65
VPS11-207ENST00000620429 A0A087X0T9 212 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 PVALEFA0A1B0GWK0 134 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 ARHGAP10A1A4S6 786 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 EXOC3O60645 756 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 TOMM70O94826 608 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 GH1P01241 217 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 FAM228BP0C875 321 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 SMIM18P0DKX4 95 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 ANPEPP15144 967 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 RXRGP48443 463 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 NAPAP54920 295 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 PTENP60484 403 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 ASPHQ12797 758 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 FSTL1Q12841 308 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 MPP2Q14168 576 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 SLC18A3Q16572 532 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 C12orf60Q5U649 245 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 OTUD6AQ7L8S5 288 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 KRT25Q7Z3Z0 450 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 ANKRD42Q8N9B4 389 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 LRRC57Q8N9N7 239 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 COX4I2Q96KJ9 171 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 RUNDC3BQ96NL0 473 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 EBF3Q9H4W6 596 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms