RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 KAT5Q92993 513 aa22.05■■□□□ 1.12
SDHA-220ENST00000617470 CDT1Q9H211 546 aa22.05■■□□□ 1.12
SDHA-220ENST00000617470 NAGPAQ9UK23 515 aa22.05■■□□□ 1.12
SDHA-220ENST00000617470 NR2E3Q9Y5X4 410 aa22.05■■□□□ 1.12
SDHA-220ENST00000617470 DDX3XO00571 662 aaKnown RBP eCLIP22.04■■□□□ 1.123e-24■■■□□ 15.1
SDHA-220ENST00000617470 ANXA13P27216 316 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 GTF2H1P32780 548 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 ACOT2P49753 483 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 OSTNP61366 133 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 FPGSQ05932 587 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 MCL1Q07820 350 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 ELF2Q15723 593 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 SEZ6Q53EL9 994 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 PAPD7Q5XG87 772 aaKnown RBP22.04■■□□□ 1.12
SDHA-220ENST00000617470 C15orf39Q6ZRI6 1047 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 SV2AQ7L0J3 742 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 TRAPPC11Q7Z392 1133 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 MNS1Q8NEH6 495 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 TAS1R2Q8TE23 839 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 APBB2Q92870 758 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 LBHD1Q9BQE6 289 aaPredicted RBP22.04■■□□□ 1.12
SDHA-220ENST00000617470 FTHL17Q9BXU8 183 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 KIAA1586Q9HCI6 787 aa22.04■■□□□ 1.12
SDHA-220ENST00000617470 ABLIM1O14639 778 aa22.03■■□□□ 1.12
SDHA-220ENST00000617470 DLATP10515 647 aaKnown RBP22.03■■□□□ 1.12
SDHA-220ENST00000617470 TUBB2AQ13885 445 aa22.03■■□□□ 1.12
SDHA-220ENST00000617470 PSMD6Q15008 389 aa22.03■■□□□ 1.12
SDHA-220ENST00000617470 TCTN1Q2MV58 587 aa22.03■■□□□ 1.12
SDHA-220ENST00000617470 SLC30A5Q8TAD4 765 aa22.03■■□□□ 1.12
SDHA-220ENST00000617470 TUBB2BQ9BVA1 445 aa22.03■■□□□ 1.12
SDHA-220ENST00000617470 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.03■■□□□ 1.124e-6■■■■■ 51.6
SDHA-220ENST00000617470 KIAA0391O15091 583 aaKnown RBP22.03■■□□□ 1.12
SDHA-220ENST00000617470 MCF2P10911 925 aa22.03■■□□□ 1.12
SDHA-220ENST00000617470 PPIGQ13427 754 aaKnown RBP eCLIP22.03■■□□□ 1.123e-6■■□□□ 13.5
SDHA-220ENST00000617470 NAB2Q15742 525 aa22.03■■□□□ 1.12
SDHA-220ENST00000617470 DCAF4L1Q3SXM0 396 aa22.03■■□□□ 1.12
SDHA-220ENST00000617470 DNAAF5Q86Y56 855 aa22.03■■□□□ 1.12
SDHA-220ENST00000617470 LNX1Q8TBB1 728 aaPredicted RBP22.03■■□□□ 1.12
SDHA-220ENST00000617470 KREMEN1Q96MU8 473 aa22.03■■□□□ 1.12
SDHA-220ENST00000617470 APOL6Q9BWW8 343 aa22.03■■□□□ 1.12
SDHA-220ENST00000617470 PTPRJQ12913 1337 aa22.02■■□□□ 1.12
SDHA-220ENST00000617470 DSC3Q14574 896 aa22.02■■□□□ 1.12
SDHA-220ENST00000617470 UBXN11Q5T124 520 aa22.02■■□□□ 1.12
SDHA-220ENST00000617470 CNKSR3Q6P9H4 555 aa22.02■■□□□ 1.12
SDHA-220ENST00000617470 CEP120Q8N960 986 aa22.02■■□□□ 1.12
SDHA-220ENST00000617470 TET1Q8NFU7 2136 aa22.02■■□□□ 1.12
SDHA-220ENST00000617470 IL23AQ9NPF7 189 aa22.02■■□□□ 1.12
SDHA-220ENST00000617470 HES2Q9Y543 173 aa22.02■■□□□ 1.12
SDHA-220ENST00000617470 MYH10P35580 1976 aa22.02■■□□□ 1.12
SDHA-220ENST00000617470 EFCAB8A8MWE9 144 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 OGTO15294 1046 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 FAM189A1O60320 539 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 IKBKEQ14164 716 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 BMS1Q14692 1282 aaKnown RBP22.01■■□□□ 1.11
SDHA-220ENST00000617470 ALKBH5Q6P6C2 394 aaKnown RBP22.01■■□□□ 1.11
SDHA-220ENST00000617470 RNF169Q8NCN4 708 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 FBXL13Q8NEE6 735 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 TRIM58Q8NG06 486 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 FAM105AQ9NUU6 356 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 PCDHB2Q9Y5E7 798 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 ANO9A1A5B4 782 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 TACC1O75410 805 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 C10orf76Q5T2E6 689 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 RSRC2Q7L4I2 434 aaKnown RBP22.01■■□□□ 1.11
SDHA-220ENST00000617470 RTN4RL1Q86UN2 441 aaPredicted RBP22.01■■□□□ 1.11
SDHA-220ENST00000617470 TXLNBQ8N3L3 684 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 RNF10Q8N5U6 811 aaKnown RBP22.01■■□□□ 1.11
SDHA-220ENST00000617470 HELQQ8TDG4 1101 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 ELMO3Q96BJ8 720 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 VWCEQ96DN2 955 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 NXF3Q9H4D5 531 aaKnown RBP22.01■■□□□ 1.11
SDHA-220ENST00000617470 PDE11AQ9HCR9 933 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 LUC7LQ9NQ29 371 aaKnown RBP22.01■■□□□ 1.11
SDHA-220ENST00000617470 RGS18Q9NS28 235 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 RAB20Q9NX57 234 aa22.01■■□□□ 1.11
SDHA-220ENST00000617470 BUB1O43683 1085 aa22■■□□□ 1.11
SDHA-220ENST00000617470 PFKMP08237 780 aa22■■□□□ 1.11
SDHA-220ENST00000617470 LMBRD2Q68DH5 695 aaPredicted RBP22■■□□□ 1.11
SDHA-220ENST00000617470 USP37Q86T82 979 aa22■■□□□ 1.11
SDHA-220ENST00000617470 LINC01599Q8WXQ3 324 aa22■■□□□ 1.11
SDHA-220ENST00000617470 TSPYL2Q9H2G4 693 aaPredicted RBP22■■□□□ 1.11
SDHA-220ENST00000617470 IPPQ9Y573 584 aa22■■□□□ 1.11
SDHA-220ENST00000617470 LDHAP00338 332 aaKnown RBP21.99■■□□□ 1.11
SDHA-220ENST00000617470 TNFSF9P41273 254 aa21.99■■□□□ 1.11
SDHA-220ENST00000617470 GLYCTKQ8IVS8 523 aa21.99■■□□□ 1.11
SDHA-220ENST00000617470 SNTG2Q9NY99 539 aa21.99■■□□□ 1.11
SDHA-220ENST00000617470 RBAKQ9NYW8 714 aaPredicted RBP21.99■■□□□ 1.11
SDHA-220ENST00000617470 ENPP3O14638 875 aa21.99■■□□□ 1.11
SDHA-220ENST00000617470 SRGAP2O75044 1071 aa21.99■■□□□ 1.11
SDHA-220ENST00000617470 C4BPAP04003 597 aaKnown RBP21.99■■□□□ 1.11
SDHA-220ENST00000617470 STAG3L1P0CL83 205 aa21.99■■□□□ 1.11
SDHA-220ENST00000617470 RAB27AP51159 221 aa21.99■■□□□ 1.11
SDHA-220ENST00000617470 WHAMMP3Q1A5X7 153 aa21.99■■□□□ 1.11
SDHA-220ENST00000617470 SLC24A5Q71RS6 500 aa21.99■■□□□ 1.11
SDHA-220ENST00000617470 OTOP2Q7RTS6 562 aa21.99■■□□□ 1.11
SDHA-220ENST00000617470 TMEM192Q8IY95 271 aa21.99■■□□□ 1.11
SDHA-220ENST00000617470 CCDC94Q9BW85 323 aaPredicted RBP21.99■■□□□ 1.11
SDHA-220ENST00000617470 PUF60Q9UHX1 559 aaKnown RBP21.99■■□□□ 1.11
SDHA-220ENST00000617470 JRKLQ9Y4A0 524 aa21.99■■□□□ 1.11
SDHA-220ENST00000617470 SAR1BQ9Y6B6 198 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms