RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 C4orf19Q8IY42 314 aa10.72□□□□□ -0.69
SMARCA1-205ENST00000617310 SLC35G2Q8TBE7 412 aa10.72□□□□□ -0.69
SMARCA1-205ENST00000617310 TTC1Q99614 292 aa10.72□□□□□ -0.69
SMARCA1-205ENST00000617310 RNF14Q9UBS8 474 aa10.72□□□□□ -0.69
SMARCA1-205ENST00000617310 KIF20BQ96Q89 1820 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 NFKBIEO00221 500 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 CKMP06732 381 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 GJB1P08034 283 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 TGFB3P10600 412 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 DEUP1Q05D60 604 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 SV2CQ496J9 727 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 MPZL3Q6UWV2 235 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 C15orf52Q6ZUT6 534 aaKnown RBP10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 ZNF720Q7Z2F6 126 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 DDX53Q86TM3 631 aaKnown RBP10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 CHSY1Q86X52 802 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 KLHL14Q9P2G3 628 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 RIPK3Q9Y572 518 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 KNL1Q8NG31 2342 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 UBA6A0AVT1 1052 aaPredicted RBP10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 EIF3DO15371 548 aaKnown RBP eCLIP10.71□□□□□ -0.693e-8■□□□□ 10.2
SMARCA1-205ENST00000617310 CIB2O75838 187 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 AP1G2O75843 785 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 ENDOD1O94919 500 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 KCNJ1P48048 391 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 KRT17Q04695 432 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 ASPHQ12797 758 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 BFSP2Q13515 415 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 MOXD1Q6UVY6 613 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 CLEC17AQ6ZS10 378 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 SV2AQ7L0J3 742 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 EFHBQ8N7U6 833 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 FAM84AQ96KN4 292 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 SLITRK1Q96PX8 696 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 EPAS1Q99814 870 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 SEMA6BQ9H3T3 888 aa10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 NOC2LQ9Y3T9 749 aaKnown RBP10.71□□□□□ -0.69
SMARCA1-205ENST00000617310 PRR23AA6NEV1 266 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 SART1O43290 800 aaKnown RBP10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 IL18RAPO95256 599 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 FAM200BP0CF97 657 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 WEE1P30291 646 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 CASP2P42575 452 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 ALDH1A3P47895 512 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 HSD17B4P51659 736 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 POU5F1BQ06416 359 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 NSUN2Q08J23 767 aaKnown RBP eCLIP10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 KIAA1755Q5JYT7 1200 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 KLHDC7AQ5VTJ3 777 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 TRIM65Q6PJ69 517 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 RNF135Q8IUD6 432 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 PNMA5Q96PV4 448 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 EDEM3Q9BZQ6 932 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 VPS11Q9H270 941 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 PDGFCQ9NRA1 345 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 DONSONQ9NYP3 566 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 FAN1Q9Y2M0 1017 aa10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 MED1Q15648 1581 aaPredicted RBP10.71□□□□□ -0.7
SMARCA1-205ENST00000617310 H3BRJ5 948 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 CCDC188H7C350 402 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 CYB561D2O14569 222 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 RTN2O75298 545 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 PPFIA4O75335 1185 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 S100BP04271 92 aaPredicted RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 THP07101 528 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 APRTP07741 180 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 PMS1P54277 932 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 MFSD10Q14728 455 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 NR1I3Q14994 352 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 IL31Q6EBC2 164 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 ZNF449Q6P9G9 518 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 CCDC137Q6PK04 289 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 VSIG10LQ86VR7 867 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 GLIS3Q8NEA6 775 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 SEPT8Q92599 483 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 VPS39Q96JC1 886 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 BTBD6Q96KE9 485 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 CFAP57Q96MR6 1250 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 DDIT4Q9NX09 232 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 AFF4Q9UHB7 1163 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 A0A087X0B3 334 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 LGALS2P05162 132 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 MMP14P50281 582 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 FKBP1AP62942 108 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 PRAMEP78395 509 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 HABP4Q5JVS0 413 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 TRAPPC11Q7Z392 1133 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 MTG1Q9BT17 334 aaPredicted RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 MKNK1Q9BUB5 465 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 A0A087X0T9 212 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 TBKBP1A7MCY6 615 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 MEIS2O14770 477 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 FAM228BP0C875 321 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 EIF3EP60228 445 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 ANO4Q32M45 955 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 B4GALNT4Q76KP1 1039 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 DCP1BQ8IZD4 617 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 TC2NQ8N9U0 490 aa10.7□□□□□ -0.7
SMARCA1-205ENST00000617310 TTC13Q8NBP0 860 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms