RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CYP27B1O15528 508 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 ASNSP08243 561 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 HLA-DPA1P20036 260 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 CCNA1P78396 465 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 CCDC85BQ15834 202 aaPredicted RBP11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 UGP2Q16851 508 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 WLSQ5T9L3 541 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 RC3H1Q5TC82 1133 aaKnown RBP11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 PGBD4Q96DM1 585 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 IFT43Q96FT9 208 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 REEP2Q9BRK0 252 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 HSPBP1Q9NZL4 362 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 DDX20Q9UHI6 824 aaKnown RBP11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 EFCAB6Q5THR3 1501 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 KIAA0391O15091 583 aaKnown RBP11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 CIITAP33076 1130 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 MKRN4PQ13434 485 aaPredicted RBP11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 TRIM16LQ309B1 348 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 TTC39BQ5VTQ0 682 aaPredicted RBP11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 TRIM65Q6PJ69 517 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 SYNE4Q8N205 404 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 RGL1Q9NZL6 768 aa11.19□□□□□ -0.62
CLTCL1-209ENST00000617103 AP3B1O00203 1094 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 STRNO43815 780 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 TBC1D4O60343 1298 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 SASH3O75995 380 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 SKOR1P84550 965 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 KCNMA1Q12791 1236 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 TRIM28Q13263 835 aaKnown RBP11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 ACTRT1Q8TDG2 376 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 PAK5Q9P286 719 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 AP4S1Q9Y587 144 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 SRP72O76094 671 aaKnown RBP11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 CHI3L2Q15782 390 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 EZH2Q15910 746 aaKnown RBP11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 C12orf60Q5U649 245 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 PPP1R16BQ96T49 567 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 ABCF3Q9NUQ8 709 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 PCDHB2Q9Y5E7 798 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 F5H6K3 240 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 HUS1O60921 280 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 WDR47O94967 919 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 SPRP35270 261 aaPredicted RBP11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 KCNQ4P56696 695 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 KLRC3Q07444 240 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 OVGP1Q12889 678 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 TTC33Q6PID6 262 aaPredicted RBP11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 CATSPER4Q7RTX7 472 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 DPP9Q86TI2 863 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 PARD3BQ8TEW8 1205 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 SEPT8Q92599 483 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 TIPINQ9BVW5 301 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 C2orf40Q9H1Z8 148 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 RXFP1Q9HBX9 757 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 GABBR1Q9UBS5 961 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 NLRP1Q9C000 1473 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 KIF1BO60333 1816 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 PJA2O43164 708 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 KRT16P08779 473 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 CD44P16070 742 aaKnown RBP11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 TCN1P20061 433 aaPredicted RBP11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 ATXN3P54252 364 aaPredicted RBP11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 HERVK_113P62684 666 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 IFNEQ86WN2 208 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 ZSWIM1Q9BR11 485 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 MRPL4Q9BYD3 311 aaKnown RBP11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 FRMD8Q9BZ67 464 aaPredicted RBP11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 HACD3Q9P035 362 aa11.18□□□□□ -0.62
CLTCL1-209ENST00000617103 MYO3BQ8WXR4 1341 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 TBX3O15119 743 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 HNRNPRO43390 633 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 PHKA2P46019 1235 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 NUP107P57740 925 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 MRPL28Q13084 256 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 SCUBE1Q8IWY4 988 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 PPIL6Q8IXY8 311 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 ABI1Q8IZP0 508 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 FBXO25Q8TCJ0 367 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 ZNF507Q8TCN5 953 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 POLR3FQ9H1D9 316 aaPredicted RBP11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 GTF3C4Q9UKN8 822 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 CDYLQ9Y232 598 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 P4HA2O15460 535 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 MYL2P10916 166 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 CALB2P22676 271 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 PTPN4P29074 926 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 LBRQ14739 615 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 SYCP2LQ5T4T6 812 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 NUP93Q8N1F7 819 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 MAML3Q96JK9 1138 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 ZNF341Q9BYN7 854 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 C15orf41Q9Y2V0 281 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 E5RI56 91 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 TMCC1O94876 653 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 GLI1P08151 1106 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 RBP3P10745 1247 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 GFAPP14136 432 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 SSTR3P32745 418 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms