RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 TARDBPQ13148 414 aaKnown RBP eCLIP4.6□□□□□ -1.67
CBWD1-224ENST00000616803 SP140Q13342 867 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 MTMR1Q13613 665 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 IL10RAQ13651 578 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 ANO4Q32M45 955 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 ZNF529Q6P280 563 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 OLFML1Q6UWY5 402 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 RHOT2Q8IXI1 618 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 SYNE4Q8N205 404 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 Q8NA96 180 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 C1orf162Q8NEQ5 155 aaPredicted RBP4.6□□□□□ -1.67
CBWD1-224ENST00000616803 ZFP28Q8NHY6 868 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 MARS2Q96GW9 593 aaKnown RBP4.6□□□□□ -1.67
CBWD1-224ENST00000616803 GSTO2Q9H4Y5 243 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 SLC5A4Q9NY91 659 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 CFDP1Q9UEE9 299 aaPredicted RBP4.6□□□□□ -1.67
CBWD1-224ENST00000616803 PACSIN3Q9UKS6 424 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 INTUQ9ULD6 942 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 ATP8A1Q9Y2Q0 1164 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 ANKRD30AQ9BXX3 1397 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 UHRF1BP1LA0JNW5 1464 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 ERCC6L2Q5T890 1561 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 TTC37Q6PGP7 1564 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 MYO5CQ9NQX4 1742 aa4.6□□□□□ -1.67
CBWD1-224ENST00000616803 PIPSLA2A3N6 862 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 PLEKHD1A6NEE1 506 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 TRIM75PA6NK02 468 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 UNC13BO14795 1591 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 PLXNC1O60486 1568 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 KATNA1O75449 491 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 FGFR4P22455 802 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 DDX6P26196 483 aaKnown RBP eCLIP4.59□□□□□ -1.67
CBWD1-224ENST00000616803 BMPR1AP36894 532 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 MPLP40238 635 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 PER3P56645 1201 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 SLFN5Q08AF3 891 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 ABCB5Q2M3G0 1257 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 C3orf36Q3SXR2 165 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 FLYWCH1Q4VC44 716 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 ZCCHC11Q5TAX3 1644 aaKnown RBP4.59□□□□□ -1.67
CBWD1-224ENST00000616803 C9orf84Q5VXU9 1444 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 OTUD7BQ6GQQ9 843 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 PGM2L1Q6PCE3 622 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 PDZD4Q76G19 769 aaPredicted RBP4.59□□□□□ -1.67
CBWD1-224ENST00000616803 ZNF575Q86XF7 245 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 MAPKAPK5Q8IW41 473 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.59□□□□□ -1.67
CBWD1-224ENST00000616803 LINC00476Q8WZB0 136 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 ZG16BQ96DA0 208 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 FAXDC2Q96IV6 333 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 UHRF1Q96T88 793 aaPredicted RBP4.59□□□□□ -1.67
CBWD1-224ENST00000616803 ADI1Q9BV57 179 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 SENP6Q9GZR1 1112 aaPredicted RBP4.59□□□□□ -1.67
CBWD1-224ENST00000616803 SLC45A2Q9UMX9 530 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 KIAA1107Q9UPP5 1409 aa4.59□□□□□ -1.67
CBWD1-224ENST00000616803 CCDC141Q6ZP82 1450 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 SPATA31E1Q6ZUB1 1445 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 ANKRD50Q9ULJ7 1429 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 MYBBP1AQ9BQG0 1328 aaKnown RBP4.58□□□□□ -1.68
CBWD1-224ENST00000616803 A0A1B0GTW7 788 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 TMEM191CA6NGB0 347 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 CCER2I3L3R5 266 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 GABRDO14764 452 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 MGST3O14880 152 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 KIAA0355O15063 1070 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 NDUFS2O75306 463 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 LMNAP02545 664 aaKnown RBP4.58□□□□□ -1.68
CBWD1-224ENST00000616803 SNRPA1P09661 255 aaKnown RBP4.58□□□□□ -1.68
CBWD1-224ENST00000616803 TYRP1P17643 537 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 ATP5JP18859 108 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 SEC24CP53992 1094 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 ZNF280AP59817 542 aaPredicted RBP4.58□□□□□ -1.68
CBWD1-224ENST00000616803 HSD11B2P80365 405 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 SEM1Q6ZVN7 128 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 PLXDC1Q8IUK5 500 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 LRIG1Q96JA1 1093 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 LANCL2Q9NS86 450 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 TRHDEQ9UKU6 1024 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 IPPQ9Y573 584 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 FPGT-TNNI3KV9GXZ4 949 aa4.58□□□□□ -1.68
CBWD1-224ENST00000616803 ARAP3Q8WWN8 1544 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 ARHGEF12Q9NZN5 1544 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 PLEKHH2Q8IVE3 1493 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 UHRF1BP1Q6BDS2 1440 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 TNKSO95271 1327 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 GAGE12BA1L429 117 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 GAGE12HA6NDE8 117 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 B3GALT2O43825 422 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 POMCP01189 267 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 MTHFD2P13995 350 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 DDCP20711 480 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 GCSHP23434 173 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 GUCY1B3Q02153 619 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 DDX10Q13206 875 aaKnown RBP4.57□□□□□ -1.68
CBWD1-224ENST00000616803 CLUL1Q15846 466 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 ZNF362Q5T0B9 420 aaPredicted RBP4.57□□□□□ -1.68
CBWD1-224ENST00000616803 DNAJC10Q8IXB1 793 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 KAT5Q92993 513 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 TLR10Q9BXR5 811 aa4.57□□□□□ -1.68
CBWD1-224ENST00000616803 PCDHB1Q9Y5F3 818 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms