RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 DDHD1Q8NEL9 900 aa19.79■□□□□ 0.76
SPAST-203ENST00000615843 TEKT2Q9UIF3 430 aa19.79■□□□□ 0.76
SPAST-203ENST00000615843 AGO2Q9UKV8 859 aaKnown RBP19.79■□□□□ 0.76
SPAST-203ENST00000615843 STAP1Q9ULZ2 295 aa19.79■□□□□ 0.76
SPAST-203ENST00000615843 MYO3BQ8WXR4 1341 aa19.79■□□□□ 0.76
SPAST-203ENST00000615843 PGBD4Q96DM1 585 aa19.79■□□□□ 0.76
SPAST-203ENST00000615843 SRP72O76094 671 aaKnown RBP19.79■□□□□ 0.76
SPAST-203ENST00000615843 TRADDQ15628 312 aa19.79■□□□□ 0.76
SPAST-203ENST00000615843 SETD3Q86TU7 594 aaPredicted RBP19.79■□□□□ 0.76
SPAST-203ENST00000615843 MTRQ99707 1265 aa19.79■□□□□ 0.76
SPAST-203ENST00000615843 SLC13A4Q9UKG4 626 aa19.79■□□□□ 0.76
SPAST-203ENST00000615843 GRID1Q9ULK0 1009 aa19.79■□□□□ 0.76
SPAST-203ENST00000615843 CLEC4FQ8N1N0 589 aa19.79■□□□□ 0.76
SPAST-203ENST00000615843 CLMNQ96JQ2 1002 aa19.79■□□□□ 0.76
SPAST-203ENST00000615843 C10orf88Q9H8K7 445 aa19.79■□□□□ 0.76
SPAST-203ENST00000615843 TET3O43151 1660 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 ATP9AO75110 1047 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 C12orf60Q5U649 245 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 NDUFAF2Q8N183 169 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 FBXO25Q8TCJ0 367 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 CNKSR1Q969H4 720 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 ULK4Q96C45 1275 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 THAP2Q9H0W7 228 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 POLR3FQ9H1D9 316 aaPredicted RBP19.78■□□□□ 0.76
SPAST-203ENST00000615843 HSPA1AP0DMV8 641 aaKnown RBP19.78■□□□□ 0.76
SPAST-203ENST00000615843 HSPA1BP0DMV9 641 aaKnown RBP19.78■□□□□ 0.76
SPAST-203ENST00000615843 MTM1Q13496 603 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 SCUBE1Q8IWY4 988 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 CLTCL1P53675 1640 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 CNTNAP5Q8WYK1 1306 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 HNRNPCL2B2RXH8 293 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 M0R3G1 203 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 SERPINB1P30740 379 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 CACNA2D1P54289 1103 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 SPOUT1Q5T280 376 aaKnown RBP19.78■□□□□ 0.76
SPAST-203ENST00000615843 GJB7Q6PEY0 223 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 SNX19Q92543 992 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 FAM111AQ96PZ2 611 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 PRPF18Q99633 342 aaKnown RBP19.78■□□□□ 0.76
SPAST-203ENST00000615843 COA1Q9GZY4 146 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 CDY2AQ9Y6F7 541 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 CDY1Q9Y6F8 540 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 ZFYVE16Q7Z3T8 1539 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 IQSEC2Q5JU85 1478 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 S100A5P33763 92 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 TNFAIP2Q03169 654 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 TRIM16LQ309B1 348 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 EFHC2Q5JST6 749 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 NUP93Q8N1F7 819 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 GABBR1Q9UBS5 961 aa19.78■□□□□ 0.76
SPAST-203ENST00000615843 PTPN4P29074 926 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 MIGA2Q7L4E1 593 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 AENQ8WTP8 325 aaKnown RBP19.77■□□□□ 0.76
SPAST-203ENST00000615843 MCEEQ96PE7 176 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 PACSIN1Q9BY11 444 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 HACD3Q9P035 362 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 F8VZ95 297 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 XPAP23025 273 aaPredicted RBP19.77■□□□□ 0.76
SPAST-203ENST00000615843 ABCE1P61221 599 aaKnown RBP19.77■□□□□ 0.76
SPAST-203ENST00000615843 PIGHQ14442 188 aaPredicted RBP19.77■□□□□ 0.76
SPAST-203ENST00000615843 ADRM1Q16186 407 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 EPB41L4AQ9HCS5 686 aaPredicted RBP19.77■□□□□ 0.76
SPAST-203ENST00000615843 CDYLQ9Y232 598 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 ABCA8O94911 1581 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 A2ML1A8K2U0 1454 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 PJA2O43164 708 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 DGKIO75912 1065 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 RALAP11233 206 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 AP3M2P53677 418 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 CACNB3P54284 484 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 PLOD1Q02809 727 aaPredicted RBP19.77■□□□□ 0.76
SPAST-203ENST00000615843 CCDC85BQ15834 202 aaPredicted RBP19.77■□□□□ 0.76
SPAST-203ENST00000615843 TTC33Q6PID6 262 aaPredicted RBP19.77■□□□□ 0.76
SPAST-203ENST00000615843 IZUMO2Q6UXV1 221 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 TMCO5AQ8N6Q1 288 aa19.77■□□□□ 0.76
SPAST-203ENST00000615843 CHORDC1Q9UHD1 332 aaPredicted RBP19.77■□□□□ 0.76
SPAST-203ENST00000615843 SLC26A4O43511 780 aa19.77■□□□□ 0.75
SPAST-203ENST00000615843 KCNA2P16389 499 aa19.77■□□□□ 0.75
SPAST-203ENST00000615843 SKOR1P84550 965 aa19.77■□□□□ 0.75
SPAST-203ENST00000615843 OR6P1Q8NGX9 317 aa19.77■□□□□ 0.75
SPAST-203ENST00000615843 ZKSCAN4Q969J2 545 aaPredicted RBP19.77■□□□□ 0.75
SPAST-203ENST00000615843 NMD3Q96D46 503 aaKnown RBP19.77■□□□□ 0.75
SPAST-203ENST00000615843 TBC1D4O60343 1298 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 CALB2P22676 271 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 MEI1Q5TIA1 1274 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 PPIL6Q8IXY8 311 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 FUKQ8N0W3 1084 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 PCYOX1LQ8NBM8 494 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 STRNO43815 780 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 MAP3K10Q02779 954 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 CLEC4GQ6UXB4 293 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 SHCBP1LQ9BZQ2 653 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 CDC42EP4Q9H3Q1 356 aaKnown RBP19.76■□□□□ 0.75
SPAST-203ENST00000615843 TRIM49D1C9J1S8 452 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 TTI2Q6NXR4 508 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 MTDHQ86UE4 582 aaKnown RBP19.76■□□□□ 0.75
SPAST-203ENST00000615843 RNF217Q8TC41 542 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 IFT43Q96FT9 208 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 MKNK1Q9BUB5 465 aa19.76■□□□□ 0.75
SPAST-203ENST00000615843 KCND1Q9NSA2 647 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms