RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 ZNF384Q8TF68 577 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 FUBP1Q96AE4 644 aaKnown RBP3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 FAM126AQ9BYI3 521 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 DNM3Q9UQ16 869 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 SALL3Q9BXA9 1300 aa3.41□□□□□ -1.86
HMGB1P24-202ENST00000615653 PIPSLA2A3N6 862 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 SGTAO43765 313 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 C1QL1O75973 258 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 PLA2G5P39877 138 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 SLC6A9P48067 706 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 CDC42EP1Q00587 391 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 SRSF4Q08170 494 aaKnown RBP3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 UBXN2BQ14CS0 331 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 CLUL1Q15846 466 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 DACT2Q5SW24 774 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 PPP4R3AQ6IN85 833 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 ZNF529Q6P280 563 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 MAPKAPK5Q8IW41 473 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 EXOC8Q8IYI6 725 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 NLGN4YQ8NFZ3 816 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 NUP133Q8WUM0 1156 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 HDAC10Q969S8 669 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 MED15Q96RN5 788 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 NELL2Q99435 816 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 NEU1Q99519 415 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 ADAM2Q99965 735 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 SEMA4GQ9NTN9 838 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 MKS1Q9NXB0 559 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 RNF181Q9P0P0 153 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 KCNE5Q9UJ90 142 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 SIK3Q9Y2K2 1263 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 NOX1Q9Y5S8 564 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 MRFAP1Q9Y605 127 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 PNPLA7Q6ZV29 1317 aa3.4□□□□□ -1.87
HMGB1P24-202ENST00000615653 SHTN1A0MZ66 631 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 WDR91A4D1P6 747 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 HAUS5O94927 633 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 RPLP2P05387 115 aaKnown RBP3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 EGR2P11161 476 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 DDCP20711 480 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 FPR1P21462 350 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 PCSK1P29120 753 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 IARSP41252 1262 aaKnown RBP3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 CTXN1P60606 82 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 ATP8B2P98198 1209 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 CREMQ03060 361 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 OCA2Q04671 838 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 RESTQ13127 1097 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 RAB39AQ14964 217 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 CCDC181Q5TID7 509 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 TSHZ3Q63HK5 1081 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 RUSC1-AS1Q66K80 236 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 PGM2L1Q6PCE3 622 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 MED25Q71SY5 747 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 CBARPQ8N350 705 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 TMEM132CQ8N3T6 1108 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 FITM2Q8N6M3 262 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 FBXO18Q8NFZ0 1043 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 NRG4Q8WWG1 115 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 BOD1Q96IK1 185 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 TEX101Q9BY14 249 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 C11orf54Q9H0W9 315 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 LDAHQ9H6V9 325 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 METTL14Q9HCE5 456 aaKnown RBP3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 TMEM74BQ9NUR3 256 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 ZNF580Q9UK33 172 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 TRHDEQ9UKU6 1024 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 RIPOR2Q9Y4F9 1068 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 ACTL7AQ9Y615 435 aa3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 MYBBP1AQ9BQG0 1328 aaKnown RBP3.39□□□□□ -1.87
HMGB1P24-202ENST00000615653 SBNO2Q9Y2G9 1366 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 LOC102724159A0A0B4J2E5 919 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 A0A1B0GTW7 788 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 KLHL33A6NCF5 533 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 UNC119BA6NIH7 251 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 ERVV-2B6SEH9 535 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 NDUFS2O75306 463 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 SPDEFO95238 335 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 ESRRBO95718 433 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 GPANK1O95872 356 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 MT-CO1P00395 513 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 AMY1AP04745 511 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 MTHFD1P11586 935 aaKnown RBP3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 CKBP12277 381 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 IBSPP21815 317 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 FGFR4P22455 802 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 FDXRP22570 491 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 GUCY2FP51841 1108 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 PTTG1IPP53801 180 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 TP53BP2Q13625 1128 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 PWP2Q15269 919 aaKnown RBP3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 HSP90AB4PQ58FF6 505 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 FOXR2Q6PJQ5 311 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 RSPH3Q86UC2 560 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 OR2I1PQ8NGU4 316 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 ZCRB1Q8TBF4 217 aaKnown RBP3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 CCHCR1Q8TD31 782 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 JADE3Q92613 823 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 MTMR8Q96EF0 704 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 PHACTR3Q96KR7 559 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms