RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 FAM86B2P0C5J1 330 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 HSD17B4P51659 736 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 FCGRTP55899 365 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 ZC2HC1CQ53FD0 456 aaPredicted RBP9.2□□□□□ -0.94
PDE6A-204ENST00000613228 PLA2G4FQ68DD2 849 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 NT5DC4Q86YG4 428 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 KIAA0895Q8NCT3 520 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 KIF12Q96FN5 646 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 SNF8Q96H20 258 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 SENP7Q9BQF6 1050 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 KLC2Q9H0B6 622 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 FBXO28Q9NVF7 368 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 GPRC5DQ9NZD1 345 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 MID2Q9UJV3 735 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 GOLGA8QA0A0J9YX86 632 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 TYW5A2RUC4 315 aaKnown RBP9.2□□□□□ -0.94
PDE6A-204ENST00000613228 GOLGA8OA6NCC3 632 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 GOLGA8NF8WBI6 632 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 AP3B1O00203 1094 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 GZMAP12544 262 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 ARL4CP56559 192 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 DEUP1Q05D60 604 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 ENPEPQ07075 957 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 CASC4Q6P4E1 433 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 ZFPM1Q8IX07 1006 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 SHCBP1Q8NEM2 672 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 SLC35G2Q8TBE7 412 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 CAMKK2Q96RR4 588 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 AIPL1Q9NZN9 384 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 PTPN22Q9Y2R2 807 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 MEIS2O14770 477 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 LSM8O95777 96 aaKnown RBP9.2□□□□□ -0.94
PDE6A-204ENST00000613228 HLA-DRAP01903 254 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 SDC4P31431 198 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 CXCR5P32302 372 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 ALDH5A1P51649 535 aaPredicted RBP9.2□□□□□ -0.94
PDE6A-204ENST00000613228 SLC12A2P55011 1212 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 PLTPP55058 493 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 RTP1P59025 263 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 ZNF280AP59817 542 aaPredicted RBP9.2□□□□□ -0.94
PDE6A-204ENST00000613228 PCBP1Q15365 356 aaKnown RBP eCLIP9.2□□□□□ -0.94
PDE6A-204ENST00000613228 NFRKBQ6P4R8 1299 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 MPZL3Q6UWV2 235 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 USP33Q8TEY7 942 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 PPP1R2P1Q96PQ5 205 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 WDR24Q96S15 920 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 CHP1Q99653 195 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 PARVBQ9HBI1 364 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 A0A087X0B3 334 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 OGTO15294 1046 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 CYP26A1O43174 497 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 FSBPO95073 299 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 NPTX2P47972 431 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 VPS41P49754 854 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 GALCP54803 685 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 PSMC1P62191 440 aaKnown RBP9.2□□□□□ -0.94
PDE6A-204ENST00000613228 EFCAB12Q6NXP0 572 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 NOTUMQ6P988 496 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 RBBP8NLQ8NC74 664 aaPredicted RBP9.2□□□□□ -0.94
PDE6A-204ENST00000613228 COG1Q8WTW3 980 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 MAML3Q96JK9 1138 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 EIF2AQ9BY44 585 aaKnown RBP9.2□□□□□ -0.94
PDE6A-204ENST00000613228 TMEM134Q9H6X4 195 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 PAPPAQ13219 1627 aa9.2□□□□□ -0.94
PDE6A-204ENST00000613228 NFIBO00712 420 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 INHBAP08476 426 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 FAM200BP0CF97 657 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 IRAK1P51617 712 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 MRPS9P82933 396 aaKnown RBP9.19□□□□□ -0.94
PDE6A-204ENST00000613228 MTF1Q14872 753 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 KLHL38Q2WGJ6 581 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 TWF2Q6IBS0 349 aaKnown RBP9.19□□□□□ -0.94
PDE6A-204ENST00000613228 TRIM65Q6PJ69 517 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 PPP4R1Q8TF05 950 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 TSPAN18Q96SJ8 248 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 C11orf70Q9BRQ4 267 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 MMADHCQ9H3L0 296 aaPredicted RBP9.19□□□□□ -0.94
PDE6A-204ENST00000613228 GTF3C4Q9UKN8 822 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 C4BP0C0L5 1744 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 IQANK1A0A1B0GTG1 560 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 MANSC4A6NHS7 340 aaPredicted RBP9.19□□□□□ -0.94
PDE6A-204ENST00000613228 PSTPIP1O43586 416 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 MSH2P43246 934 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 CYP24A1Q07973 514 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 MKRN3Q13064 507 aaKnown RBP9.19□□□□□ -0.94
PDE6A-204ENST00000613228 NAA35Q5VZE5 725 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 SPATA4Q8NEY3 305 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 AP1M1Q9BXS5 423 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 FUT8Q9BYC5 575 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 INTS9Q9NV88 658 aaKnown RBP9.19□□□□□ -0.94
PDE6A-204ENST00000613228 AXLP30530 894 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 ZNF157P51786 506 aaPredicted RBP9.19□□□□□ -0.94
PDE6A-204ENST00000613228 PAPD7Q5XG87 772 aaKnown RBP9.19□□□□□ -0.94
PDE6A-204ENST00000613228 ACAD10Q6JQN1 1059 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 ATP8B4Q8TF62 1192 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 CYP3A43Q9HB55 503 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 LTBP3Q9NS15 1303 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 RASGRF2O14827 1237 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 LIN7AO14910 233 aaPredicted RBP9.19□□□□□ -0.94
PDE6A-204ENST00000613228 ZBED1O96006 694 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms