RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 TOPORSQ9NS56 1045 aaPredicted RBP18.9■□□□□ 0.62
CSNK1E-215ENST00000612795 PODXLO00592 558 aa18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 SYN3O14994 580 aa18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 GJA1P17302 382 aa18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 KPNA1P52294 538 aaPredicted RBP18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 TPGS2Q68CL5 300 aa18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 MFSD6LQ8IWD5 586 aa18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 HS6ST3Q8IZP7 471 aa18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 FAM160A2Q8N612 972 aaPredicted RBP18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 C12orf50Q8NA57 414 aaPredicted RBP18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 LEMD2Q8NC56 503 aa18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 WASF1Q92558 559 aa18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 KIFC3Q9BVG8 833 aa18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 TUFT1Q9NNX1 390 aa18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 RBM12Q9NTZ6 932 aaKnown RBP18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 SLC38A7Q9NVC3 462 aa18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 DAXXQ9UER7 740 aaPredicted RBP18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 NUB1Q9Y5A7 615 aa18.89■□□□□ 0.61
CSNK1E-215ENST00000612795 SDK1Q7Z5N4 2213 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 SMIM28A0A1B0GU29 152 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 ARHGEF35A5YM69 484 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 SLC38A8A6NNN8 435 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 HEPACAM2A8MVW5 462 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 DTNBO60941 627 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 SOX4Q06945 474 aaPredicted RBP18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 TWF1Q12792 350 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 TEAD2Q15562 447 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 CTXN3Q4LDR2 81 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 ZNF280DQ6N043 979 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 PADI6Q6TGC4 694 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 IFT74Q96LB3 600 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 NACC1Q96RE7 527 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 CCDC94Q9BW85 323 aaPredicted RBP18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 PDRG1Q9NUG6 133 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 ORC3Q9UBD5 711 aaPredicted RBP18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 FBXL5Q9UKA1 691 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 NCANO14594 1321 aa18.88■□□□□ 0.61
CSNK1E-215ENST00000612795 K7ESF4 209 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 PAPSS2O95340 614 aaPredicted RBP18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 SPATA31C1P0DKV0 1188 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 CPB1P15086 417 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 EFNA5P52803 228 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 EML5Q05BV3 1969 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 Q6ZS52 159 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 CATSPER3Q86XQ3 398 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 TNFRSF25Q93038 417 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 E2F7Q96AV8 911 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 TM6SF1Q9BZW5 370 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 GPR88Q9GZN0 384 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 C8orf33Q9H7E9 229 aaPredicted RBP18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 TRPV4Q9HBA0 871 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 CEP72Q9P209 647 aa18.87■□□□□ 0.61
CSNK1E-215ENST00000612795 ARNTLO00327 626 aa18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 MOSPD3O75425 235 aa18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 MED24O75448 989 aa18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 CYP11B2P19099 503 aa18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 PMLP29590 882 aa18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 SOX9P48436 509 aa18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 LIMK1P53667 647 aa18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 MLLT6P55198 1093 aaPredicted RBP18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 OSTNP61366 133 aa18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 ZNF568Q3ZCX4 644 aa18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 DGKKQ5KSL6 1271 aa18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 N4BP2L1Q5TBK1 243 aaPredicted RBP18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 NT5DC1Q5TFE4 455 aa18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 CEP120Q8N960 986 aa18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 AFF4Q9UHB7 1163 aaKnown RBP18.86■□□□□ 0.61
CSNK1E-215ENST00000612795 CHADO15335 359 aa18.85■□□□□ 0.61
CSNK1E-215ENST00000612795 MCM4P33991 863 aa18.85■□□□□ 0.61
CSNK1E-215ENST00000612795 GRM5P41594 1212 aa18.85■□□□□ 0.61
CSNK1E-215ENST00000612795 EPHA5P54756 1037 aa18.85■□□□□ 0.61
CSNK1E-215ENST00000612795 SF3A2Q15428 464 aaKnown RBP18.85■□□□□ 0.61
CSNK1E-215ENST00000612795 ERMNQ8TAM6 284 aa18.85■□□□□ 0.61
CSNK1E-215ENST00000612795 MTMR9Q96QG7 549 aa18.85■□□□□ 0.61
CSNK1E-215ENST00000612795 ARRDC1-AS1Q9H2J1 176 aa18.85■□□□□ 0.61
CSNK1E-215ENST00000612795 RALYQ9UKM9 306 aaKnown RBP18.85■□□□□ 0.61
CSNK1E-215ENST00000612795 FAM208BQ5VWN6 2430 aa18.85■□□□□ 0.61
CSNK1E-215ENST00000612795 MYH11P35749 1972 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 ZNF638Q14966 1978 aaKnown RBP18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 SPECC1L-ADORA2AF8WAN1 911 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 WNT7AO00755 349 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 AXIN1O15169 862 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 CTHP32929 405 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 MRPL58Q14197 206 aaKnown RBP18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 CCDC6Q16204 474 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 WDR5BQ86VZ2 330 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 APPL2Q8NEU8 664 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 SHKBP1Q8TBC3 707 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 POLR3CQ9BUI4 534 aaPredicted RBP18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 CDT1Q9H211 546 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 MAFFQ9ULX9 164 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 TNFSF13BQ9Y275 285 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 YIPF1Q9Y548 306 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 ATG2BQ96BY7 2078 aa18.84■□□□□ 0.61
CSNK1E-215ENST00000612795 PHLPP2Q6ZVD8 1323 aa18.83■□□□□ 0.61
CSNK1E-215ENST00000612795 A0A1W2PRU2 124 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 K7ERI5 159 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 PFKFB2O60825 505 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 RPL9P32969 192 aaKnown RBP18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 SHC2P98077 582 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms