RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 A0A1W2PQC6 194 aa13.82□□□□□ -0.2
PRKN-210ENST00000612540 TBKBP1A7MCY6 615 aa13.82□□□□□ -0.2
PRKN-210ENST00000612540 SLC9A1P19634 815 aa13.82□□□□□ -0.2
PRKN-210ENST00000612540 GRIN2CQ14957 1233 aa13.82□□□□□ -0.2
PRKN-210ENST00000612540 WDR44Q5JSH3 913 aa13.82□□□□□ -0.2
PRKN-210ENST00000612540 C15orf39Q6ZRI6 1047 aa13.82□□□□□ -0.2
PRKN-210ENST00000612540 VSTM4Q8IW00 320 aa13.82□□□□□ -0.2
PRKN-210ENST00000612540 SEMA4DQ92854 862 aa13.82□□□□□ -0.2
PRKN-210ENST00000612540 FAM193BQ96PV7 902 aaPredicted RBP13.82□□□□□ -0.2
PRKN-210ENST00000612540 PPP1R10Q96QC0 940 aaKnown RBP13.82□□□□□ -0.2
PRKN-210ENST00000612540 PI4K2AQ9BTU6 479 aa13.82□□□□□ -0.2
PRKN-210ENST00000612540 RAB20Q9NX57 234 aa13.82□□□□□ -0.2
PRKN-210ENST00000612540 MIOSQ9NXC5 875 aa13.82□□□□□ -0.2
PRKN-210ENST00000612540 AGAP1Q9UPQ3 857 aa13.82□□□□□ -0.2
PRKN-210ENST00000612540 CASTOR2A6NHX0 329 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 GOLGA6L6A8MZA4 724 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 VNN1O95497 513 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 TRIM21P19474 475 aaKnown RBP13.81□□□□□ -0.2
PRKN-210ENST00000612540 PON1P27169 355 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 CDC25BP30305 580 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 MCCD1P59942 119 aaPredicted RBP13.81□□□□□ -0.2
PRKN-210ENST00000612540 MYL6P60660 151 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 RBP5P82980 135 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 SOX4Q06945 474 aaPredicted RBP13.81□□□□□ -0.2
PRKN-210ENST00000612540 ZNF699Q32M78 642 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 SPECC1LQ69YQ0 1117 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 TRIM65Q6PJ69 517 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.81□□□□□ -0.2
PRKN-210ENST00000612540 TMCO2Q7Z6W1 182 aaPredicted RBP13.81□□□□□ -0.2
PRKN-210ENST00000612540 EHBP1Q8NDI1 1231 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 GSTCDQ8NEC7 633 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 ELMO3Q96BJ8 720 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 TIFAQ96CG3 184 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 NT5C1BQ96P26 610 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 MRPL9Q9BYD2 267 aaKnown RBP13.81□□□□□ -0.2
PRKN-210ENST00000612540 PBX4Q9BYU1 374 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 TBC1D13Q9NVG8 400 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 KANSL3Q9P2N6 904 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 SIX4Q9UIU6 781 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 SIK3Q9Y2K2 1263 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.81□□□□□ -0.2
PRKN-210ENST00000612540 CHD9Q3L8U1 2897 aa13.81□□□□□ -0.2
PRKN-210ENST00000612540 GRXCR1A8MXD5 290 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 PMM2O15305 246 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 INPPL1O15357 1258 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 LRRN2O75325 713 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 TPM1P09493 284 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 CYP3A5P20815 502 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 PBX1P40424 430 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 PBX2P40425 430 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 NOP14P78316 857 aaKnown RBP13.8□□□□□ -0.2
PRKN-210ENST00000612540 APBA1Q02410 837 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 KCNMA1Q12791 1236 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 TUSC3Q13454 348 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 ZBTB6Q15916 424 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 SPOPLQ6IQ16 392 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 PPFIBP1Q86W92 1011 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 LRRC43Q8N309 656 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 HERVK_113Q902F9 699 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 ZNF560Q96MR9 790 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 CASD1Q96PB1 797 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 YME1L1Q96TA2 773 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 ZBED2Q9BTP6 218 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 ZNF576Q9H609 170 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 CXXC1Q9P0U4 656 aaPredicted RBP13.8□□□□□ -0.2
PRKN-210ENST00000612540 CACNG4Q9UBN1 327 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 COQ4Q9Y3A0 265 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRKN-210ENST00000612540 SLC4A7Q9Y6M7 1214 aa13.8□□□□□ -0.2
PRKN-210ENST00000612540 PODXLO00592 558 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 PPEF2O14830 753 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 ZC3H11AO75152 810 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRKN-210ENST00000612540 CST3P01034 146 aaPredicted RBP13.79□□□□□ -0.2
PRKN-210ENST00000612540 MYO1EQ12965 1108 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 RAPGEF1Q13905 1077 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 TRIM14Q14142 442 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 ZNF667Q5HYK9 610 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
PRKN-210ENST00000612540 C9orf57Q5W0N0 161 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 SCARA3Q6AZY7 606 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 GJB7Q6PEY0 223 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 SCARA5Q6ZMJ2 495 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 CACNA2D4Q7Z3S7 1137 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 PPM1KQ8N3J5 372 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 CPLX3Q8WVH0 158 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 RABGGTAQ92696 567 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 TOP1MTQ969P6 601 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 HPDLQ96IR7 371 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 TCF20Q9UGU0 1960 aaKnown RBP13.79□□□□□ -0.2
PRKN-210ENST00000612540 ITIH6Q6UXX5 1313 aa13.79□□□□□ -0.2
PRKN-210ENST00000612540 EPHB6O15197 1021 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 DGKIO75912 1065 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 ASS1P00966 412 aaKnown RBP13.78□□□□□ -0.2
PRKN-210ENST00000612540 PTMAP06454 111 aaKnown RBP13.78□□□□□ -0.2
PRKN-210ENST00000612540 LRPAP1P30533 357 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 ATICP31939 592 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 OR1G1P47890 313 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 TAF6P49848 677 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 POLR2FP61218 127 aaKnown RBP13.78□□□□□ -0.2
PRKN-210ENST00000612540 TNNC1P63316 161 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms