RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 ROPN1BQ9BZX4 212 aaPredicted RBP12.97□□□□□ -0.33
HLCS-207ENST00000612277 C14orf93Q9H972 538 aaKnown RBP12.97□□□□□ -0.33
HLCS-207ENST00000612277 ROPN1Q9HAT0 212 aaPredicted RBP12.97□□□□□ -0.33
HLCS-207ENST00000612277 IDH3BO43837 385 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 SESN2P58004 480 aaPredicted RBP12.97□□□□□ -0.33
HLCS-207ENST00000612277 SFSWAPQ12872 951 aaKnown RBP12.97□□□□□ -0.33
HLCS-207ENST00000612277 ZNF544Q6NX49 715 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 LCORLQ8N3X6 602 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 VPS37AQ8NEZ2 397 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 SDR42E1Q8WUS8 393 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 WDR60Q8WVS4 1066 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 AMACRQ9UHK6 382 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 USP27XA6NNY8 438 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 M0R2C6 588 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 PHF2O75151 1096 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 PSMB9P28065 219 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 TAP1Q03518 808 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 EFHBQ8N7U6 833 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 PGBD4Q96DM1 585 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 ARHGEF38Q9NXL2 777 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 ZNF624Q9P2J8 865 aaPredicted RBP12.97□□□□□ -0.33
HLCS-207ENST00000612277 STAP1Q9ULZ2 295 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 TRIM17Q9Y577 477 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 ADGRG1Q9Y653 693 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 KANSL1LA0AUZ9 987 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 FAM20BO75063 409 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 UBXN2AP68543 259 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 PTK7Q13308 1070 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 ZNF568Q3ZCX4 644 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 GADL1Q6ZQY3 521 aa12.97□□□□□ -0.33
HLCS-207ENST00000612277 RIBC1Q8N443 379 aaPredicted RBP12.97□□□□□ -0.33
HLCS-207ENST00000612277 ADGRL1O94910 1474 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 F8W810 466 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 PSAPP07602 524 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 HOXB7P09629 217 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 YY1P25490 414 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 ITGA1P56199 1179 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 STX5Q13190 355 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 USP10Q14694 798 aaKnown RBP12.96□□□□□ -0.33
HLCS-207ENST00000612277 UGP2Q16851 508 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 IZUMO2Q6UXV1 221 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 SUGP1Q8IWZ8 645 aaKnown RBP12.96□□□□□ -0.33
HLCS-207ENST00000612277 SNX13Q9Y5W8 968 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 FGAP02671 866 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 EIF3EP60228 445 aaKnown RBP12.96□□□□□ -0.33
HLCS-207ENST00000612277 TRAF3Q13114 568 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 ZNF284Q2VY69 593 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 MTERF2Q49AM1 385 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 TAF2Q6P1X5 1199 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 SCUBE1Q8IWY4 988 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 B3GALT6Q96L58 329 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 MXD3Q9BW11 206 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 CD274Q9NZQ7 290 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 ADGRA2Q96PE1 1338 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 PIK3C2GO75747 1445 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 ZMYM4Q5VZL5 1548 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 TMEM120BA0PK00 339 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 PHGDHO43175 533 aaKnown RBP12.96□□□□□ -0.33
HLCS-207ENST00000612277 ABCB1P08183 1280 aaPredicted RBP12.96□□□□□ -0.33
HLCS-207ENST00000612277 ITIH2P19823 946 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 TRIM32Q13049 653 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 RESP18Q5W5W9 173 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 E2F7Q96AV8 911 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 CYP39A1Q9NYL5 469 aa12.96□□□□□ -0.33
HLCS-207ENST00000612277 LSM1O15116 133 aaKnown RBP12.96□□□□□ -0.34
HLCS-207ENST00000612277 P3H1Q32P28 736 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 LARGE2Q8N3Y3 721 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 MOSPD2Q8NHP6 518 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 ZNF496Q96IT1 587 aaPredicted RBP12.96□□□□□ -0.34
HLCS-207ENST00000612277 CHID1Q9BWS9 393 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 PRRG3Q9BZD7 231 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 M0QYV0 167 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 GNPATO15228 680 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 HUS1O60921 280 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 PAX7P23759 505 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 NNMTP40261 264 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 IRAK1P51617 712 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 CHRNB3Q05901 458 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 GPATCH4Q5T3I0 446 aaKnown RBP12.96□□□□□ -0.34
HLCS-207ENST00000612277 SDE2Q6IQ49 451 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 SYTL1Q8IYJ3 562 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 CACTIN-AS1Q8N1I8 211 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 RNASE11Q8TAA1 199 aaKnown RBP12.96□□□□□ -0.34
HLCS-207ENST00000612277 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 DCLRE1BQ9H816 532 aa12.96□□□□□ -0.34
HLCS-207ENST00000612277 FTLP02792 175 aaPredicted RBP12.95□□□□□ -0.34
HLCS-207ENST00000612277 CCT8P50990 548 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 CHI3L2Q15782 390 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 MZT2BQ6NZ67 158 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 TSHZ1Q6ZSZ6 1077 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 FOPNLQ96NB1 174 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 TMEM79Q9BSE2 394 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 EURLQ9NYK6 297 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 DFFAO00273 331 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 LRPAP1P30533 357 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 ZNF699Q32M78 642 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 FUT11Q495W5 492 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 TMEM270Q6UE05 265 aa12.95□□□□□ -0.34
HLCS-207ENST00000612277 FASTKD5Q7L8L6 764 aaKnown RBP12.95□□□□□ -0.34
HLCS-207ENST00000612277 EDC3Q96F86 508 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms