RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 SNX31Q8N9S9 440 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 KCNK16Q96T55 309 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 MAP3K20Q9NYL2 800 aaKnown RBP13.71□□□□□ -0.21
USP6NL-205ENST00000609104 PPP1R18Q6NYC8 613 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 SPATA2LQ8IUW3 424 aaPredicted RBP13.71□□□□□ -0.21
USP6NL-205ENST00000609104 CCDC134Q9H6E4 229 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 IRX1P78414 480 aaPredicted RBP13.71□□□□□ -0.21
USP6NL-205ENST00000609104 MTM1Q13496 603 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 SLC18A3Q16572 532 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 CXorf56Q9H5V9 222 aa13.71□□□□□ -0.21
USP6NL-205ENST00000609104 M0R3G1 203 aa13.71□□□□□ -0.22
USP6NL-205ENST00000609104 RUNX1T1Q06455 604 aa13.71□□□□□ -0.22
USP6NL-205ENST00000609104 PRPF18Q99633 342 aaKnown RBP13.71□□□□□ -0.22
USP6NL-205ENST00000609104 RNF146Q9NTX7 359 aa13.71□□□□□ -0.22
USP6NL-205ENST00000609104 SMARCAL1Q9NZC9 954 aa13.71□□□□□ -0.22
USP6NL-205ENST00000609104 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.71□□□□□ -0.22
USP6NL-205ENST00000609104 FOXP2O15409 715 aa13.71□□□□□ -0.22
USP6NL-205ENST00000609104 C9orf72Q96LT7 481 aa13.71□□□□□ -0.22
USP6NL-205ENST00000609104 BATF3Q9NR55 127 aa13.71□□□□□ -0.22
USP6NL-205ENST00000609104 BLOC1S6Q9UL45 172 aa13.71□□□□□ -0.22
USP6NL-205ENST00000609104 SAMD9Q5K651 1589 aa13.71□□□□□ -0.22
USP6NL-205ENST00000609104 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.22
USP6NL-205ENST00000609104 ATP6V1B1P15313 513 aa13.71□□□□□ -0.22
USP6NL-205ENST00000609104 CENPPQ6IPU0 288 aa13.71□□□□□ -0.22
USP6NL-205ENST00000609104 EXOSC4Q9NPD3 245 aaKnown RBP13.71□□□□□ -0.22
USP6NL-205ENST00000609104 ATP7BP35670 1465 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 AP3B1O00203 1094 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 AKT1P31749 480 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 CCDC103Q8IW40 242 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 RTKN2Q8IZC4 609 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 TSPAN17Q96FV3 270 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 DDX50Q9BQ39 737 aaKnown RBP13.7□□□□□ -0.22
USP6NL-205ENST00000609104 MTO1Q9Y2Z2 717 aaKnown RBP13.7□□□□□ -0.22
USP6NL-205ENST00000609104 B2RBV5 119 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 HIST1H2AGP0C0S8 130 aaPredicted RBP13.7□□□□□ -0.22
USP6NL-205ENST00000609104 HIST1H2ADP20671 130 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 DNAJC9Q8WXX5 260 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 PIGBQ92521 554 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 HIST1H2AHQ96KK5 128 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 HIST1H2AJQ99878 128 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 H2AFJQ9BTM1 129 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 MYO3BQ8WXR4 1341 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 HMBSP08397 361 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 PDGFRBP09619 1106 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 TCF3P15923 654 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 SOAT1P35610 550 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 POTEAQ6S8J7 498 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 APEX2Q9UBZ4 518 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 F5H6K3 240 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 KRT16P08779 473 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 SERPINB1P30740 379 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 KLRC3Q07444 240 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 PIGHQ14442 188 aaPredicted RBP13.7□□□□□ -0.22
USP6NL-205ENST00000609104 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 GTF2H3Q13889 308 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 DTNBP1Q96EV8 351 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
USP6NL-205ENST00000609104 SRP72O76094 671 aaKnown RBP13.7□□□□□ -0.22
USP6NL-205ENST00000609104 CCND1P24385 295 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 DEFA1P59665 94 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 DEFA3P59666 94 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 ORC2Q13416 577 aaPredicted RBP13.7□□□□□ -0.22
USP6NL-205ENST00000609104 TRIP10Q15642 601 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 FOPNLQ96NB1 174 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 CHMP2BQ9UQN3 213 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 IGSF1Q8N6C5 1336 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 ITIH2P19823 946 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 NLRP11P59045 1033 aaKnown RBP13.7□□□□□ -0.22
USP6NL-205ENST00000609104 BRD8Q9H0E9 1235 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 AATKQ6ZMQ8 1374 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 CDH16O75309 829 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 RAD51Q06609 339 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 IL31Q6EBC2 164 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 HAUS6Q7Z4H7 955 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 PLEKHA8Q96JA3 519 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 KCNF1Q9H3M0 494 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 OLFML3Q9NRN5 406 aa13.7□□□□□ -0.22
USP6NL-205ENST00000609104 LTKP29376 864 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 RASGRP2Q7LDG7 609 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 DLGAP2Q9P1A6 1054 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 KIF28PB7ZC32 967 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 HNRNPRO43390 633 aaKnown RBP13.69□□□□□ -0.22
USP6NL-205ENST00000609104 GUCY1A2P33402 732 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 GALCP54803 685 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 GPSM2P81274 684 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 VEPH1Q14D04 833 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 CCNI2Q6ZMN8 369 aaPredicted RBP13.69□□□□□ -0.22
USP6NL-205ENST00000609104 C11orf96Q7Z7L8 435 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 TTC39CQ8N584 583 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 CNDP1Q96KN2 507 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 ATPAF2Q8N5M1 289 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 WNK4Q96J92 1243 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 FBXO2Q9UK22 296 aaPredicted RBP13.69□□□□□ -0.22
USP6NL-205ENST00000609104 TTC37Q6PGP7 1564 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 GRAP2O75791 330 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 TARSP26639 723 aaKnown RBP13.69□□□□□ -0.22
USP6NL-205ENST00000609104 SMTNL2Q2TAL5 461 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 FUT11Q495W5 492 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 LRIG3Q6UXM1 1119 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 CELF4Q9BZC1 486 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms