RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	LINC00301	Q8NCQ3	95 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	ZNF461	Q8TAF7	563 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	STAM	Q92783	540 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	HVCN1	Q96D96	273 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	GOLGA2P5	Q9HBQ8	144 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	AVEN	Q9NQS1	362 aa	Predicted RBP	11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	OLFML3	Q9NRN5	406 aa		11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	CPSF3	Q9UKF6	684 aa	Known RBP	11.69	□□□□□ -0.54
TPM2-208	ENST00000607559	CLUH	O75153	1309 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	ARHGEF37	A1IGU5	675 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	ANHX	E9PGG2	379 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559		M0QZQ0	153 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	PODXL	O00592	558 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	OAZ2	O95190	189 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	SPATA31D3	P0C874	917 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	GAP43	P17677	238 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	TKT	P29401	623 aa	Known RBP	11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	OR1D2	P34982	312 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	OSTN	P61366	133 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	ENOX2	Q16206	610 aa	Known RBP	11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	RRAGB	Q5VZM2	374 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	TPGS2	Q68CL5	300 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	ATL3	Q6DD88	541 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	SLFN12L	Q6IEE8	588 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	CCDC73	Q6ZRK6	1079 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	SPATA31D4	Q6ZUB0	917 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	SV2B	Q7L1I2	683 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	CEP57	Q86XR8	500 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	KCNV2	Q8TDN2	545 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	HASPIN	Q8TF76	798 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	SMG7	Q92540	1137 aa	Known RBP	11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	DDX12P	Q92771	950 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	C18orf25	Q96B23	403 aa	Predicted RBP	11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	CLIC6	Q96NY7	704 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	ASB7	Q9H672	318 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	KCNK12	Q9HB15	430 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	DERA	Q9Y315	318 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	SPTBN4	Q9H254	2564 aa		11.68	□□□□□ -0.54
TPM2-208	ENST00000607559	MYMK	A6NI61	221 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	HNRNPDL	O14979	420 aa	Known RBP	11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	YEATS4	O95619	227 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	LAMP2	P13473	410 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	ATF2	P15336	505 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	AVPR2	P30518	371 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	BRCC3	P46736	316 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	LIG4	P49917	911 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	TDG	Q13569	410 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	SPECC1	Q5M775	1068 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	SPATA1	Q5VX52	437 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	TCEAL8	Q8IYN2	117 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	PRSS33	Q8NF86	280 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	BEST2	Q8NFU1	509 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	KCNH3	Q9ULD8	1083 aa		11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	UBQLN1	Q9UMX0	589 aa	Known RBP	11.67	□□□□□ -0.54
TPM2-208	ENST00000607559	WDR87	Q6ZQQ6	2873 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	DENND4A	Q7Z401	1863 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559		A0A087X0B3	334 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	ANO9	A1A5B4	782 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	LACTBL1	A8MY62	500 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	ANKRD63	C9JTQ0	380 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559		H7C4K7	107 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	TBCA	O75347	108 aa	Known RBP	11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	MICAL2	O94851	1124 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	ASGR2	P07307	311 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	CXCL8	P10145	99 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	SP100	P23497	879 aa	Predicted RBP	11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	NMT1	P30419	496 aa	Known RBP	11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	ADSS	P30520	456 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	TXLNA	P40222	546 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	ALCAM	Q13740	583 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	DHX8	Q14562	1220 aa	Known RBP	11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	POSTN	Q15063	836 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	SEZ6	Q53EL9	994 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	SLC44A3	Q8N4M1	653 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	APPL2	Q8NEU8	664 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	ZNF396	Q96N95	335 aa	Predicted RBP	11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	MYADM	Q96S97	322 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	CUEDC2	Q9H467	287 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	KBTBD4	Q9NVX7	518 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	ANKFY1	Q9P2R3	1169 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	DUSP12	Q9UNI6	340 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	C2CD2	Q9Y426	696 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	CDY1	Q9Y6F8	540 aa		11.66	□□□□□ -0.54
TPM2-208	ENST00000607559	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.65	□□□□□ -0.54
TPM2-208	ENST00000607559		K7ENM7	598 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	PIR	O00625	290 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	SPTLC2	O15270	562 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	XPOT	O43592	962 aa	Known RBP	11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	XYLB	O75191	536 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	KRT18	P05783	430 aa	Known RBP	11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	C8A	P07357	584 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	TNFSF9	P41273	254 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	CLCN5	P51795	746 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	ROR1	Q01973	937 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	PPP2R3A	Q06190	1150 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	PPM1L	Q5SGD2	360 aa		11.65	□□□□□ -0.54
TPM2-208	ENST00000607559	LIN9	Q5TKA1	542 aa		11.65	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms