RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 NKX1-1Q15270 411 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 ZNF568Q3ZCX4 644 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 CLEC4GQ6UXB4 293 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 IFNEQ86WN2 208 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 STKLD1Q8NE28 680 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 TEX12Q9BXU0 123 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 GRIP2Q9C0E4 1043 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 SLC8A2Q9UPR5 921 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 IGSF1Q8N6C5 1336 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 F8VZ95 297 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 HOXA7P31268 230 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 PRELPP51888 382 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 C21orf59P57076 290 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 OVGP1Q12889 678 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 C1orf228Q6PIY5 440 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 REXO1L1PQ8IX06 675 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 FAM213AQ9BRX8 229 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 ASNSD1Q9NWL6 643 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 FASTKD1Q53R41 847 aaKnown RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 BTN2A1Q7KYR7 527 aa9.13□□□□□ -0.95
CSMD1-216ENST00000602557 POLR3FQ9H1D9 316 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-216ENST00000602557 E5RI56 91 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 CLDN3O15551 220 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 STAT3P40763 770 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 DRAP1Q14919 205 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 ASPSCR1Q9BZE9 553 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 C16orf96A6NNT2 1141 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 FAM182BQ5T319 152 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 LLGL2Q6P1M3 1020 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 IFT43Q96FT9 208 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 NEUROG2Q9H2A3 272 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 SPATA2Q9UM82 520 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 ARHGEF40Q8TER5 1519 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 MYL3P08590 195 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 PSMC3P17980 439 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 RUNX1T1Q06455 604 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 BYSLQ13895 437 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 SCN4BQ8IWT1 228 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 FMR1NBQ8N0W7 255 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 SYTL2Q9HCH5 934 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 SRP68Q9UHB9 627 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 GLI2P10070 1586 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 F8W8V4 182 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 RGS5O15539 181 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 IREB2P48200 963 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 PDAP1Q13442 181 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 ARHGAP17Q68EM7 881 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 CCDC137Q6PK04 289 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 GDPD5Q8WTR4 605 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 DDX56Q9NY93 547 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 PHKA2P46019 1235 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 TWF2Q6IBS0 349 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 TRMT2AQ8IZ69 625 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 CASKIN2Q8WXE0 1202 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 LY9Q9HBG7 655 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 USE1Q9NZ43 259 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 ZNF180Q9UJW8 692 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 CDV3Q9UKY7 258 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 C1orf232A0A0U1RR37 186 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 ZNF839A8K0R7 811 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 KPNA7A9QM74 516 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 BBOX1O75936 387 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 FTLP02792 175 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 BAG6P46379 1132 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 PFKFB3Q16875 520 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 C16orf89Q6UX73 402 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 USP33Q8TEY7 942 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 KLHL20Q9Y2M5 609 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 MTO1Q9Y2Z2 717 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 ZCCHC11Q5TAX3 1644 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 RPAP1Q9BWH6 1393 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 P4HA2O15460 535 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 CHRNA3P32297 505 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 HSD17B3P37058 310 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 MAP3K10Q02779 954 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 STRBPQ96SI9 672 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 BRIP1Q9BX63 1249 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 NSMCE4AQ9NXX6 385 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 SDK1Q7Z5N4 2213 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 CLTCL1P53675 1640 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 HEG1Q9ULI3 1381 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 PLEKHG1Q9ULL1 1385 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 NRKQ7Z2Y5 1582 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 PTPN12Q05209 780 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 EPS8L3Q8TE67 593 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 CHP1Q99653 195 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 SLC9A2Q9UBY0 812 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 MEI4A8MW99 385 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 PIK3R2O00459 728 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 NECTIN1Q15223 517 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 HIF1AQ16665 826 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 CYB5R4Q7L1T6 521 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 KRT73Q86Y46 540 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 ZNF579Q8NAF0 562 aaKnown RBP9.12□□□□□ -0.95
CSMD1-216ENST00000602557 ULK4Q96C45 1275 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 METP08581 1390 aa9.12□□□□□ -0.95
CSMD1-216ENST00000602557 DFFAO00273 331 aa9.11□□□□□ -0.95
CSMD1-216ENST00000602557 HMOX2P30519 316 aa9.11□□□□□ -0.95
CSMD1-216ENST00000602557 POTEAQ6S8J7 498 aa9.11□□□□□ -0.95
CSMD1-216ENST00000602557 KLF6Q99612 283 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms