RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SMIM28A0A1B0GU29 152 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 DCDC2CA8MYV0 355 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 RBAK-RBAKDNI3L0D1 243 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 PITPNM1O00562 1244 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 CYP26A1O43174 497 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 ZNF623O75123 536 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 P4HA1P13674 534 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 POLR2BP30876 1174 aaKnown RBP19.31■□□□□ 0.68
VRK3-225ENST00000601912 CLCN1P35523 988 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 GJA8P48165 433 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 CYP27A1Q02318 531 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 DSC3Q14574 896 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 BMS1Q14692 1282 aaKnown RBP19.31■□□□□ 0.68
VRK3-225ENST00000601912 ARHGAP29Q52LW3 1261 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 ZNF667Q5HYK9 610 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 DNTTIP2Q5QJE6 756 aaKnown RBP19.31■□□□□ 0.68
VRK3-225ENST00000601912 SMYD5Q6GMV2 418 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 ANKRD33Q7Z3H0 272 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 ANKLE1Q8NAG6 615 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 C16orf45Q96MC5 204 aaPredicted RBP19.31■□□□□ 0.68
VRK3-225ENST00000601912 ARID3AQ99856 593 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 ADAM2Q99965 735 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 IFIH1Q9BYX4 1025 aaKnown RBP19.31■□□□□ 0.68
VRK3-225ENST00000601912 AGAP1Q9UPQ3 857 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 REXO2Q9Y3B8 237 aaKnown RBP19.31■□□□□ 0.68
VRK3-225ENST00000601912 PCDHA13Q9Y5I0 950 aa19.31■□□□□ 0.68
VRK3-225ENST00000601912 KIF2AO00139 706 aaPredicted RBP19.3■□□□□ 0.68
VRK3-225ENST00000601912 MNX1P50219 401 aaPredicted RBP19.3■□□□□ 0.68
VRK3-225ENST00000601912 BPIFB4P59827 614 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 YWHAEP62258 255 aaKnown RBP19.3■□□□□ 0.68
VRK3-225ENST00000601912 MYO1EQ12965 1108 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 GLRA4Q5JXX5 417 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 SCARA3Q6AZY7 606 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 MRPL10Q7Z7H8 261 aaKnown RBP19.3■□□□□ 0.68
VRK3-225ENST00000601912 CXorf38Q8TB03 319 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 PGBD4Q96DM1 585 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 HPDLQ96IR7 371 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 VRTNQ9H8Y1 702 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 BRCA2P51587 3418 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 A0A087X0T9 212 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 A0A0U1RQF3 1178 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 TUBB4AP04350 444 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 FAM228BP0C875 321 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 TNFAIP3P21580 790 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 MAGEA1P43355 309 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 WDR72Q3MJ13 1102 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 C10orf76Q5T2E6 689 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 C1orf53Q5VUE5 145 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 FAM43BQ6ZT52 329 aaPredicted RBP19.3■□□□□ 0.68
VRK3-225ENST00000601912 NYAP1Q6ZVC0 841 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 TOX2Q96NM4 488 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 CXCL16Q9H2A7 254 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 LZTFL1Q9NQ48 299 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 NXF1Q9UBU9 619 aaKnown RBP19.3■□□□□ 0.68
VRK3-225ENST00000601912 GIT1Q9Y2X7 761 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 PCDHB4Q9Y5E5 795 aa19.3■□□□□ 0.68
VRK3-225ENST00000601912 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.3■□□□□ 0.68
VRK3-225ENST00000601912 UMODL1Q5DID0 1318 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 ZNF263O14978 683 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 MGEA5O60502 916 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 STAU1O95793 577 aaKnown RBP19.29■□□□□ 0.68
VRK3-225ENST00000601912 CAPN2P17655 700 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 CYP3A5P20815 502 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 PDE6CP51160 858 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 GUCY2FP51841 1108 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 VAV2P52735 878 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 MBTPS1Q14703 1052 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 ZNF662Q6ZS27 426 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 RPS6KC1Q96S38 1066 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 AGPAT1Q99943 283 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 FTHL17Q9BXU8 183 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 TSGA10Q9BZW7 698 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 UBN1Q9NPG3 1134 aa19.29■□□□□ 0.68
VRK3-225ENST00000601912 TRIP11Q15643 1979 aa19.28■□□□□ 0.68
VRK3-225ENST00000601912 KRT86O43790 486 aa19.28■□□□□ 0.68
VRK3-225ENST00000601912 COL6A1P12109 1028 aa19.28■□□□□ 0.68
VRK3-225ENST00000601912 ATF7P17544 494 aaPredicted RBP19.28■□□□□ 0.68
VRK3-225ENST00000601912 ACO1P21399 889 aaKnown RBP19.28■□□□□ 0.68
VRK3-225ENST00000601912 KIF5AQ12840 1032 aa19.28■□□□□ 0.68
VRK3-225ENST00000601912 TMEM270Q6UE05 265 aa19.28■□□□□ 0.68
VRK3-225ENST00000601912 SLC47A2Q86VL8 602 aa19.28■□□□□ 0.68
VRK3-225ENST00000601912 C18orf25Q96B23 403 aaPredicted RBP19.28■□□□□ 0.68
VRK3-225ENST00000601912 TMEM106CQ9BVX2 250 aa19.28■□□□□ 0.68
VRK3-225ENST00000601912 SLC38A7Q9NVC3 462 aa19.28■□□□□ 0.68
VRK3-225ENST00000601912 TUBGCP4Q9UGJ1 667 aa19.28■□□□□ 0.68
VRK3-225ENST00000601912 TNNT1P13805 278 aa19.27■□□□□ 0.68
VRK3-225ENST00000601912 CYP11B1P15538 503 aa19.27■□□□□ 0.68
VRK3-225ENST00000601912 ASPAP45381 313 aa19.27■□□□□ 0.68
VRK3-225ENST00000601912 ALKBH5Q6P6C2 394 aaKnown RBP19.27■□□□□ 0.68
VRK3-225ENST00000601912 LRRC52Q8N7C0 313 aa19.27■□□□□ 0.68
VRK3-225ENST00000601912 EPS8L1Q8TE68 723 aa19.27■□□□□ 0.68
VRK3-225ENST00000601912 SYT11Q9BT88 431 aa19.27■□□□□ 0.68
VRK3-225ENST00000601912 RGS18Q9NS28 235 aa19.27■□□□□ 0.68
VRK3-225ENST00000601912 SEPT11Q9NVA2 429 aaKnown RBP19.27■□□□□ 0.68
VRK3-225ENST00000601912 NAGPAQ9UK23 515 aa19.27■□□□□ 0.68
VRK3-225ENST00000601912 CNTN6Q9UQ52 1028 aa19.27■□□□□ 0.68
VRK3-225ENST00000601912 DDX3XO00571 662 aaKnown RBP eCLIP19.27■□□□□ 0.673e-12■■□□□ 11.9
VRK3-225ENST00000601912 PARNO95453 639 aaKnown RBP19.27■□□□□ 0.67
VRK3-225ENST00000601912 TNNC1P63316 161 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 TLE2Q04725 743 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms