RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 SLC38A7Q9NVC3 462 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 CEP72Q9P209 647 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 CITO14578 2027 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 RALGAPA1Q6GYQ0 2036 aa18.39■□□□□ 0.53
USE1-208ENST00000600970 K7ERI5 159 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 ZNF263O14978 683 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 HRO43593 1189 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 LARGE1O95461 756 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 GJA1P17302 382 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 CCNE1P24864 410 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 DMWDQ09019 674 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 TWF1Q12792 350 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 SIM2Q14190 667 aaPredicted RBP18.38■□□□□ 0.53
USE1-208ENST00000600970 CTXN3Q4LDR2 81 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 IQCEQ6IPM2 695 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 MFSD6LQ8IWD5 586 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 NSUN7Q8NE18 718 aaKnown RBP18.38■□□□□ 0.53
USE1-208ENST00000600970 ERMNQ8TAM6 284 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 ZSCAN18Q8TBC5 510 aaPredicted RBP18.38■□□□□ 0.53
USE1-208ENST00000600970 KIFAP3Q92845 792 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 ZNF512Q96ME7 567 aaPredicted RBP18.38■□□□□ 0.53
USE1-208ENST00000600970 ACO2Q99798 780 aaKnown RBP18.38■□□□□ 0.53
USE1-208ENST00000600970 TRPV4Q9HBA0 871 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 PTPRHQ9HD43 1115 aa18.38■□□□□ 0.53
USE1-208ENST00000600970 CHURC1-FNTBB4DL54 471 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 ARNTLO00327 626 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 MYL4P12829 197 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 MUTP22033 750 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 FNTBP49356 437 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 EPHA5P54756 1037 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 SRSF5Q13243 272 aaKnown RBP18.37■□□□□ 0.53
USE1-208ENST00000600970 PTGDRQ13258 359 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 TRIM29Q14134 588 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 ANKRD1Q15327 319 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 CSRP2Q16527 193 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 ECM1Q16610 540 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 ME3Q16798 604 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 ZNF568Q3ZCX4 644 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 PRR23CQ6ZRP0 262 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 GTF3C6Q969F1 213 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 AFF4Q9UHB7 1163 aaKnown RBP18.37■□□□□ 0.53
USE1-208ENST00000600970 NUB1Q9Y5A7 615 aa18.37■□□□□ 0.53
USE1-208ENST00000600970 HEPACAM2A8MVW5 462 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 GDF9O60383 454 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 KCNE1P15382 129 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 RPL9P32969 192 aaKnown RBP18.36■□□□□ 0.53
USE1-208ENST00000600970 MLLT6P55198 1093 aaPredicted RBP18.36■□□□□ 0.53
USE1-208ENST00000600970 TEAD2Q15562 447 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 ZNF280DQ6N043 979 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 PHLPP2Q6ZVD8 1323 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 SPEM1Q8N4L4 309 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 LEMD2Q8NC56 503 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 C18orf25Q96B23 403 aaPredicted RBP18.36■□□□□ 0.53
USE1-208ENST00000600970 SUSD3Q96L08 255 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 ACAP3Q96P50 834 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 BHMT2Q9H2M3 363 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 ASAH2Q9NR71 780 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 CNTN3Q9P232 1028 aa18.36■□□□□ 0.53
USE1-208ENST00000600970 K7ESF4 209 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 JAK2O60674 1132 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 OR52Z1P0C646 297 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 CNR2P34972 360 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 PEX3P56589 373 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 WDR44Q5JSH3 913 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 RNF19BQ6ZMZ0 732 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 TAS1R3Q7RTX0 852 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.35■□□□□ 0.53
USE1-208ENST00000600970 SHKBP1Q8TBC3 707 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 CSGALNACT1Q8TDX6 532 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 DDX12PQ92771 950 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 RSPRY1Q96DX4 576 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 MSANTD3Q96H12 275 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 TMEM134Q9H6X4 195 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 RBM12Q9NTZ6 932 aaKnown RBP18.35■□□□□ 0.53
USE1-208ENST00000600970 MAFFQ9ULX9 164 aa18.35■□□□□ 0.53
USE1-208ENST00000600970 CCDC169A6NNP5 214 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 MEFVO15553 781 aaPredicted RBP18.34■□□□□ 0.53
USE1-208ENST00000600970 PAPSS2O95340 614 aaPredicted RBP18.34■□□□□ 0.53
USE1-208ENST00000600970 CPB1P15086 417 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 MCM4P33991 863 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 CCT6AP40227 531 aaKnown RBP18.34■□□□□ 0.53
USE1-208ENST00000600970 NPTX2P47972 431 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 SOX9P48436 509 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 LRRC32Q14392 662 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 ZNF174Q15697 407 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 HAUS3Q68CZ6 603 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 LONP2Q86WA8 852 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 APPL2Q8NEU8 664 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 E2F7Q96AV8 911 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 CHAMP1Q96JM3 812 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 TBC1D32Q96NH3 1257 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 TARS2Q9BW92 718 aaKnown RBP18.34■□□□□ 0.53
USE1-208ENST00000600970 MRPL4Q9BYD3 311 aaKnown RBP18.34■□□□□ 0.53
USE1-208ENST00000600970 GPR88Q9GZN0 384 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 SLITRK6Q9H5Y7 841 aa18.34■□□□□ 0.53
USE1-208ENST00000600970 F5P12259 2224 aa18.33■□□□□ 0.53
USE1-208ENST00000600970 SLC38A8A6NNN8 435 aa18.33■□□□□ 0.52
USE1-208ENST00000600970 ABLIM1O14639 778 aa18.33■□□□□ 0.52
USE1-208ENST00000600970 CHADO15335 359 aa18.33■□□□□ 0.52
USE1-208ENST00000600970 MCF2P10911 925 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms