RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 A0A087X0T9 212 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 CYP26A1O43174 497 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 FAM228BP0C875 321 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 ACO1P21399 889 aaKnown RBP25.06■■□□□ 1.6
SYMPK-212ENST00000598896 CLCN1P35523 988 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 FMNL3Q8IVF7 1028 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 LPPQ93052 612 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 ZFP42Q96MM3 310 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 ADAM2Q99965 735 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 IFIH1Q9BYX4 1025 aaKnown RBP25.06■■□□□ 1.6
SYMPK-212ENST00000598896 ITGA11Q9UKX5 1188 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 CCP110O43303 1012 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 ABL1P00519 1130 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 KCNE1P15382 129 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 BFSP2Q13515 415 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 GPNMBQ14956 572 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 NYAP1Q6ZVC0 841 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 NIF3L1Q9GZT8 377 aa25.06■■□□□ 1.6
SYMPK-212ENST00000598896 ATF7P17544 494 aaPredicted RBP25.05■■□□□ 1.6
SYMPK-212ENST00000598896 TBXAS1P24557 533 aaPredicted RBP25.05■■□□□ 1.6
SYMPK-212ENST00000598896 ASPAP45381 313 aa25.05■■□□□ 1.6
SYMPK-212ENST00000598896 SLC18A3Q16572 532 aa25.05■■□□□ 1.6
SYMPK-212ENST00000598896 TRIM60Q495X7 471 aa25.05■■□□□ 1.6
SYMPK-212ENST00000598896 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.05■■□□□ 1.6
SYMPK-212ENST00000598896 AGAP1Q9UPQ3 857 aa25.05■■□□□ 1.6
SYMPK-212ENST00000598896 PITPNM1O00562 1244 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 PTGESO14684 152 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 NBNO60934 754 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 MRPL10Q7Z7H8 261 aaKnown RBP25.04■■□□□ 1.6
SYMPK-212ENST00000598896 SLC47A2Q86VL8 602 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 GSTCDQ8NEC7 633 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 EPS8L1Q8TE68 723 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 SLC20A1Q8WUM9 679 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 POLIQ9UNA4 740 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 A0A0U1RQF3 1178 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 RCCD1A6NED2 376 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 PPEF2O14830 753 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 CCDC172P0C7W6 258 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 ITGA4P13612 1032 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 KRT5P13647 590 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 MLH1P40692 756 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 AFF1P51825 1210 aaKnown RBP25.04■■□□□ 1.6
SYMPK-212ENST00000598896 KRT83P78385 493 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 FAAP100Q0VG06 881 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 SPA17Q15506 151 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 AGMOQ6ZNB7 445 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 UBR7Q8N806 425 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 LNX1Q8TBB1 728 aaPredicted RBP25.04■■□□□ 1.6
SYMPK-212ENST00000598896 TAF4BQ92750 862 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 JAKMIP2Q96AA8 810 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 LZTFL1Q9NQ48 299 aa25.04■■□□□ 1.6
SYMPK-212ENST00000598896 NXF1Q9UBU9 619 aaKnown RBP25.04■■□□□ 1.6
SYMPK-212ENST00000598896 UBQLN1Q9UMX0 589 aaKnown RBP25.04■■□□□ 1.6
SYMPK-212ENST00000598896 TANC1Q9C0D5 1861 aa25.03■■□□□ 1.6
SYMPK-212ENST00000598896 SCN1AP35498 2009 aa25.03■■□□□ 1.6
SYMPK-212ENST00000598896 DDX3XO00571 662 aaKnown RBP eCLIP25.03■■□□□ 1.6
SYMPK-212ENST00000598896 ZNF623O75123 536 aa25.03■■□□□ 1.6
SYMPK-212ENST00000598896 OFD1O75665 1012 aa25.03■■□□□ 1.6
SYMPK-212ENST00000598896 IPO7O95373 1038 aaKnown RBP25.03■■□□□ 1.6
SYMPK-212ENST00000598896 ARHGAP25P42331 645 aa25.03■■□□□ 1.6
SYMPK-212ENST00000598896 SOX4Q06945 474 aaPredicted RBP25.03■■□□□ 1.6
SYMPK-212ENST00000598896 WDR72Q3MJ13 1102 aa25.03■■□□□ 1.6
SYMPK-212ENST00000598896 SCARA5Q6ZMJ2 495 aa25.03■■□□□ 1.6
SYMPK-212ENST00000598896 NOP9Q86U38 636 aaKnown RBP25.03■■□□□ 1.6
SYMPK-212ENST00000598896 RTN4RL1Q86UN2 441 aaPredicted RBP25.03■■□□□ 1.6
SYMPK-212ENST00000598896 BEST2Q8NFU1 509 aa25.03■■□□□ 1.6
SYMPK-212ENST00000598896 LINC01599Q8WXQ3 324 aa25.03■■□□□ 1.6
SYMPK-212ENST00000598896 VRTNQ9H8Y1 702 aa25.03■■□□□ 1.6
SYMPK-212ENST00000598896 NOCTQ9UK39 431 aaKnown RBP25.03■■□□□ 1.6
SYMPK-212ENST00000598896 TLR3O15455 904 aaKnown RBP25.02■■□□□ 1.6
SYMPK-212ENST00000598896 CALCAP01258 141 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 ATICP31939 592 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 RAB27AP51159 221 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 RBP5P82980 135 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 TLE2Q04725 743 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 C1orf53Q5VUE5 145 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 HPDLQ96IR7 371 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 GAD1Q99259 594 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 TRIM10Q9UDY6 481 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 PCDHA13Q9Y5I0 950 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 KIAA0100Q14667 2235 aaKnown RBP25.02■■□□□ 1.6
SYMPK-212ENST00000598896 ZNF667Q5HYK9 610 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 GLYCTKQ8IVS8 523 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 HACE1Q8IYU2 909 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 SLC30A5Q8TAD4 765 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 LACRTQ9GZZ8 138 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 GOLGA2P5Q9HBQ8 144 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 NENFQ9UMX5 172 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 CNTN6Q9UQ52 1028 aa25.02■■□□□ 1.6
SYMPK-212ENST00000598896 WEE2P0C1S8 567 aa25.01■■□□□ 1.59
SYMPK-212ENST00000598896 CYP11B1P15538 503 aa25.01■■□□□ 1.59
SYMPK-212ENST00000598896 IBSPP21815 317 aaPredicted RBP25.01■■□□□ 1.59
SYMPK-212ENST00000598896 BMS1Q14692 1282 aaKnown RBP25.01■■□□□ 1.59
SYMPK-212ENST00000598896 TMEM270Q6UE05 265 aa25.01■■□□□ 1.59
SYMPK-212ENST00000598896 PALB2Q86YC2 1186 aa25.01■■□□□ 1.59
SYMPK-212ENST00000598896 ANKLE1Q8NAG6 615 aa25.01■■□□□ 1.59
SYMPK-212ENST00000598896 PAWRQ96IZ0 340 aaKnown RBP25.01■■□□□ 1.59
SYMPK-212ENST00000598896 TOX2Q96NM4 488 aa25.01■■□□□ 1.59
SYMPK-212ENST00000598896 PPP1R10Q96QC0 940 aaKnown RBP25.01■■□□□ 1.59
SYMPK-212ENST00000598896 TSPAN18Q96SJ8 248 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms