RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 PTPN21Q16825 1174 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 ZNF699Q32M78 642 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 SPOUT1Q5T280 376 aaKnown RBP20.76■□□□□ 0.91
LTBP4-223ENST00000598717 TRIM65Q6PJ69 517 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 COLGALT2Q8IYK4 626 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 TMEM130Q8N3G9 435 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 LRRC52Q8N7C0 313 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 NEK11Q8NG66 645 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 TAF4BQ92750 862 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 HPDLQ96IR7 371 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 RAD9AQ99638 391 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 NRDE2Q9H7Z3 1164 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 INSL6Q9Y581 213 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 TRIP11Q15643 1979 aa20.76■□□□□ 0.91
LTBP4-223ENST00000598717 OR1G1P47890 313 aa20.75■□□□□ 0.91
LTBP4-223ENST00000598717 HTRA4P83105 476 aaPredicted RBP20.75■□□□□ 0.91
LTBP4-223ENST00000598717 LRMPQ12912 555 aa20.75■□□□□ 0.91
LTBP4-223ENST00000598717 DRC7Q8IY82 874 aa20.75■□□□□ 0.91
LTBP4-223ENST00000598717 LMO3Q8TAP4 145 aa20.75■□□□□ 0.91
LTBP4-223ENST00000598717 CXorf38Q8TB03 319 aa20.75■□□□□ 0.91
LTBP4-223ENST00000598717 NT5C1BQ96P26 610 aa20.75■□□□□ 0.91
LTBP4-223ENST00000598717 TMEM175Q9BSA9 504 aa20.75■□□□□ 0.91
LTBP4-223ENST00000598717 PI4K2AQ9BTU6 479 aa20.75■□□□□ 0.91
LTBP4-223ENST00000598717 RC3H2Q9HBD1 1191 aaKnown RBP20.75■□□□□ 0.91
LTBP4-223ENST00000598717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.75■□□□□ 0.911e-6■■■■■ 53.6
LTBP4-223ENST00000598717 SIK3Q9Y2K2 1263 aa20.75■□□□□ 0.91
LTBP4-223ENST00000598717 PPEF2O14830 753 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 TLL1O43897 1013 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 ASS1P00966 412 aaKnown RBP20.74■□□□□ 0.91
LTBP4-223ENST00000598717 ALDH2P05091 517 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 PBX1P40424 430 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 TAF6P49848 677 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 KLK7P49862 253 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 NOP14P78316 857 aaKnown RBP20.74■□□□□ 0.91
LTBP4-223ENST00000598717 MLLT1Q03111 559 aaPredicted RBP20.74■□□□□ 0.91
LTBP4-223ENST00000598717 PDCD11Q14690 1871 aaKnown RBP20.74■□□□□ 0.91
LTBP4-223ENST00000598717 UPP1Q16831 310 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 SV2CQ496J9 727 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 ZNF667Q5HYK9 610 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 SCARA3Q6AZY7 606 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 DCLRE1AQ6PJP8 1040 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 VSTM4Q8IW00 320 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 PLCB1Q9NQ66 1216 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 FAM207AQ9NSI2 230 aaPredicted RBP20.74■□□□□ 0.91
LTBP4-223ENST00000598717 CACNG4Q9UBN1 327 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 DNAJB4Q9UDY4 337 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 FAN1Q9Y2M0 1017 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 NUB1Q9Y5A7 615 aa20.74■□□□□ 0.91
LTBP4-223ENST00000598717 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.74■□□□□ 0.918e-7■□□□□ 10.2
LTBP4-223ENST00000598717 LRRN2O75325 713 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 B3GAT3O94766 335 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 STAU1O95793 577 aaKnown RBP20.73■□□□□ 0.91
LTBP4-223ENST00000598717 P4HA1P13674 534 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 TRIM21P19474 475 aaKnown RBP20.73■□□□□ 0.91
LTBP4-223ENST00000598717 WDR72Q3MJ13 1102 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 SPECC1LQ69YQ0 1117 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 TMC6Q7Z403 805 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 FIBCD1Q8N539 461 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 RABGGTAQ92696 567 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 PAAF1Q9BRP4 392 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 NUP58Q9BVL2 599 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 COLEC11Q9BWP8 271 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 XYLT2Q9H1B5 865 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 APEX2Q9UBZ4 518 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 ITIH6Q6UXX5 1313 aa20.73■□□□□ 0.91
LTBP4-223ENST00000598717 TDRD15B5MCY1 1934 aaKnown RBP20.72■□□□□ 0.91
LTBP4-223ENST00000598717 CARNS1A5YM72 827 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 NRP1O14786 923 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 B4GALT3O60512 393 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 PAX3P23760 479 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 CDC25BP30305 580 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 BMP8BP34820 402 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 ALDH7A1P49419 539 aaKnown RBP20.72■□□□□ 0.91
LTBP4-223ENST00000598717 TNNC1P63316 161 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 KLHDC7AQ5VTJ3 777 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 SPOPLQ6IQ16 392 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.72■□□□□ 0.91
LTBP4-223ENST00000598717 PPM1KQ8N3J5 372 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 IQCDQ96DY2 449 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 FAM81BQ96LP2 452 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 CWH43Q9H720 699 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 VRTNQ9H8Y1 702 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 HCSTQ9UBK5 93 aa20.72■□□□□ 0.91
LTBP4-223ENST00000598717 NXF1Q9UBU9 619 aaKnown RBP20.72■□□□□ 0.91
LTBP4-223ENST00000598717 PRG3Q9Y2Y8 225 aaPredicted RBP20.72■□□□□ 0.91
LTBP4-223ENST00000598717 FNDC1Q4ZHG4 1894 aaPredicted RBP20.71■□□□□ 0.91
LTBP4-223ENST00000598717 KPNA7A9QM74 516 aa20.71■□□□□ 0.91
LTBP4-223ENST00000598717 GALTP07902 379 aa20.71■□□□□ 0.91
LTBP4-223ENST00000598717 LAG3P18627 525 aa20.71■□□□□ 0.91
LTBP4-223ENST00000598717 SLC11A1P49279 550 aa20.71■□□□□ 0.91
LTBP4-223ENST00000598717 BCAR1P56945 870 aa20.71■□□□□ 0.91
LTBP4-223ENST00000598717 LILRA4P59901 499 aa20.71■□□□□ 0.91
LTBP4-223ENST00000598717 APBA1Q02410 837 aa20.71■□□□□ 0.91
LTBP4-223ENST00000598717 PHLDB3Q6NSJ2 640 aa20.71■□□□□ 0.91
LTBP4-223ENST00000598717 PPFIBP1Q86W92 1011 aa20.71■□□□□ 0.91
LTBP4-223ENST00000598717 TATDN2Q93075 761 aa20.71■□□□□ 0.91
LTBP4-223ENST00000598717 ELMO3Q96BJ8 720 aa20.71■□□□□ 0.91
LTBP4-223ENST00000598717 NIF3L1Q9GZT8 377 aa20.71■□□□□ 0.91
LTBP4-223ENST00000598717 APOBEC3GQ9HC16 384 aaKnown RBP20.71■□□□□ 0.91
LTBP4-223ENST00000598717 SIX2Q9NPC8 291 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms