RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 STAMQ92783 540 aa14.97□□□□□ -0.01
SCAF1-203ENST00000598359 FGFBP2Q9BYJ0 223 aa14.97□□□□□ -0.01
SCAF1-203ENST00000598359 RPF1Q9H9Y2 349 aaKnown RBP14.97□□□□□ -0.01
SCAF1-203ENST00000598359 PLEKHA5Q9HAU0 1116 aa14.97□□□□□ -0.01
SCAF1-203ENST00000598359 TIMM13Q9Y5L4 95 aaPredicted RBP14.97□□□□□ -0.01
SCAF1-203ENST00000598359 BACE2Q9Y5Z0 518 aa14.97□□□□□ -0.01
SCAF1-203ENST00000598359 FAM186AA6NE01 2351 aa14.97□□□□□ -0.01
SCAF1-203ENST00000598359 PDCD11Q14690 1871 aaKnown RBP14.97□□□□□ -0.01
SCAF1-203ENST00000598359 WDR27A2RRH5 827 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 IDEP14735 1019 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 FSHRP23945 695 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 CASP5P51878 434 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 TDGQ13569 410 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 PKP1Q13835 747 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 ZBTB6Q15916 424 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 JADE1Q6IE81 842 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 ZNF720Q7Z2F6 126 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 ITFG1Q8TB96 612 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 SUSD3Q96L08 255 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 MRPL44Q9H9J2 332 aaKnown RBP14.96□□□□□ -0.01
SCAF1-203ENST00000598359 FAM86C1Q9NVL1 165 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 EPS15L1Q9UBC2 864 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 FBXL5Q9UKA1 691 aa14.96□□□□□ -0.01
SCAF1-203ENST00000598359 CPSF3Q9UKF6 684 aaKnown RBP14.96□□□□□ -0.01
SCAF1-203ENST00000598359 VPS13AQ96RL7 3174 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 TULP1O00294 542 aaPredicted RBP14.95□□□□□ -0.02
SCAF1-203ENST00000598359 SYN3O14994 580 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 SPTLC2O15270 562 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 TBC1D4O60343 1298 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 SEC24AO95486 1093 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 HSP90AA1P07900 732 aaKnown RBP14.95□□□□□ -0.02
SCAF1-203ENST00000598359 NFICP08651 508 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 HNRNPA1P09651 372 aaKnown RBP eCLIP14.95□□□□□ -0.02
SCAF1-203ENST00000598359 MRPL58Q14197 206 aaKnown RBP14.95□□□□□ -0.02
SCAF1-203ENST00000598359 CTXN3Q4LDR2 81 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 ADALQ6DHV7 355 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 SLC8B1Q6J4K2 584 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 CCDC73Q6ZRK6 1079 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 ZSWIM2Q8NEG5 633 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 ST6GALNAC4Q9H4F1 302 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 UBQLN1Q9UMX0 589 aaKnown RBP14.95□□□□□ -0.02
SCAF1-203ENST00000598359 PCDHB8Q9UN66 801 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 MORC2Q9Y6X9 1032 aaPredicted RBP14.95□□□□□ -0.02
SCAF1-203ENST00000598359 DOCK6Q96HP0 2047 aa14.95□□□□□ -0.02
SCAF1-203ENST00000598359 MYH15Q9Y2K3 1946 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 XYLBO75191 536 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 PPP1R37O75864 691 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 GCNT3O95395 438 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 LAMP2P13473 410 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 SCP2P22307 547 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 AVPR2P30518 371 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 ADSSP30520 456 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 LRPAP1P30533 357 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 ING5Q8WYH8 240 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 HPS3Q969F9 1004 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 ZNF396Q96N95 335 aaPredicted RBP14.94□□□□□ -0.02
SCAF1-203ENST00000598359 RPP25Q9BUL9 199 aaKnown RBP14.94□□□□□ -0.02
SCAF1-203ENST00000598359 STRA6Q9BX79 667 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 CYP4F11Q9HBI6 524 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 IGSF9Q9P2J2 1179 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 DNMT3BQ9UBC3 853 aaKnown RBP14.94□□□□□ -0.02
SCAF1-203ENST00000598359 AGO2Q9UKV8 859 aaKnown RBP14.94□□□□□ -0.02
SCAF1-203ENST00000598359 DMDP11532 3685 aa14.94□□□□□ -0.02
SCAF1-203ENST00000598359 DOCK8Q8NF50 2099 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 H7C4K7 107 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 PRRG1O14668 218 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 SPTLC1O15269 473 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 ABLIM3O94929 683 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 ADRB2P07550 413 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 CFHP08603 1231 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 OR4Q2P0C623 313 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 ZSCAN22P10073 491 aaPredicted RBP14.93□□□□□ -0.02
SCAF1-203ENST00000598359 GAP43P17677 238 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 CYP3A5P20815 502 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 HOXA9P31269 272 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 CDR1P51861 262 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 HTR4Q13639 388 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 TMEM132DQ14C87 1099 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 KYAT1Q16773 422 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 SPATA1Q5VX52 437 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 ZNF280DQ6N043 979 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 SHC4Q6S5L8 630 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 CRELD2Q6UXH1 353 aaPredicted RBP14.93□□□□□ -0.02
SCAF1-203ENST00000598359 DSTYKQ6XUX3 929 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 SLC44A3Q8N4M1 653 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 TMEM105Q8N8V8 129 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 GLIS3Q8NEA6 775 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 FLCNQ8NFG4 579 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 ZNF461Q8TAF7 563 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 POMGNT1Q8WZA1 660 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 SAAL1Q96ER3 474 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 FAM84AQ96KN4 292 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 PANK4Q9NVE7 773 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.93□□□□□ -0.02
SCAF1-203ENST00000598359 SEL1LQ9UBV2 794 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 FBXL21Q9UKT6 434 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 DUSP12Q9UNI6 340 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 STYXL1Q9Y6J8 313 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 NUMBLQ9Y6R0 609 aa14.93□□□□□ -0.02
SCAF1-203ENST00000598359 M0QZQ0 153 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms