RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 PRSS36Q5K4E3 855 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 ZBTB41Q5SVQ8 909 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 HYIQ5T013 277 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 TANGO2Q6ICL3 276 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 TPRG1Q6ZUI0 275 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 C1orf210Q8IVY1 113 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 SYT2Q8N9I0 419 aaPredicted RBP13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 TMEM161BQ8NDZ6 487 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 ZNF461Q8TAF7 563 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 KCNG4Q8TDN1 519 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 DDX12PQ92771 950 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 TBC1D32Q96NH3 1257 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 CORO1BQ9BR76 489 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 LTB4R2Q9NPC1 389 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 KCNH3Q9ULD8 1083 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 STK24Q9Y6E0 443 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 SHISA7A6NL88 538 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 SYN3O14994 580 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 LMNAP02545 664 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 PLA2G4BP0C869 781 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 PLS3P13797 630 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 ATF2P15336 505 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 GJA1P17302 382 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 PTPN2P17706 415 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 GJB2P29033 226 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 ELF1P32519 619 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 MATR3P43243 847 aaKnown RBP eCLIP13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 STRN3Q13033 797 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 MRPL58Q14197 206 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 CTXN3Q4LDR2 81 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 TMEM119Q4V9L6 283 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 ZNF280DQ6N043 979 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 SPIRE2Q8WWL2 714 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 SUSD3Q96L08 255 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 C17orf75Q9HAS0 396 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 HEBP1Q9NRV9 189 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 RBM19Q9Y4C8 960 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 TIMM13Q9Y5L4 95 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 MYH10P35580 1976 aa13.21□□□□□ -0.29
SOX2-OT-228ENST00000597828 PPEF2O14830 753 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 MOSPD3O75425 235 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 ECI2O75521 394 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 TOM1L1O75674 476 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 VNN2O95498 520 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 OR4Q2P0C623 313 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 CPB1P15086 417 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 NCKAP1LP55160 1127 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 PRKCQQ04759 706 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 GRIN1Q05586 938 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 ADCY1Q08828 1119 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 TWF1Q12792 350 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 DHX8Q14562 1220 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 RILPL1Q5EBL4 403 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 TCEAL8Q8IYN2 117 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 DCLK2Q8N568 766 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 SHDQ96IW2 340 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 CDK5RAP3Q96JB5 506 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 TMX3Q96JJ7 454 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 ZSWIM3Q96MP5 696 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 REEP2Q9BRK0 252 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 NTPCRQ9BSD7 190 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 SPATA6Q9NWH7 488 aaPredicted RBP13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 CEP72Q9P209 647 aa13.2□□□□□ -0.3
SOX2-OT-228ENST00000597828 CEP250Q9BV73 2442 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 FAM170BA6NMN3 283 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 H7C4K7 107 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 RPL9P32969 192 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 ID4P47928 161 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 MCL1Q07820 350 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 FAM78AQ5JUQ0 283 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 TSSK4Q6SA08 328 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 VITQ6UXI7 678 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 ZPBP2Q6X784 338 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 PDZD4Q76G19 769 aaPredicted RBP13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 RTL10Q7L3V2 364 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 KIAA2013Q8IYS2 634 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 ELSPBP1Q96BH3 223 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 KIF12Q96FN5 646 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 BICD1Q96G01 975 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 PGLYRP2Q96PD5 576 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 TIPINQ9BVW5 301 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 BCO2Q9BYV7 579 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 CRISPLD1Q9H336 500 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 AVENQ9NQS1 362 aaPredicted RBP13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 GDE1Q9NZC3 331 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 PCDHB8Q9UN66 801 aa13.19□□□□□ -0.3
SOX2-OT-228ENST00000597828 TTC26A0AVF1 554 aa13.18□□□□□ -0.3
SOX2-OT-228ENST00000597828 H3BQV1 296 aa13.18□□□□□ -0.3
SOX2-OT-228ENST00000597828 K7ENM7 598 aa13.18□□□□□ -0.3
SOX2-OT-228ENST00000597828 CLDN3O15551 220 aa13.18□□□□□ -0.3
SOX2-OT-228ENST00000597828 FAM189A1O60320 539 aa13.18□□□□□ -0.3
SOX2-OT-228ENST00000597828 MYL4P12829 197 aa13.18□□□□□ -0.3
SOX2-OT-228ENST00000597828 CDR1P51861 262 aa13.18□□□□□ -0.3
SOX2-OT-228ENST00000597828 SMTNP53814 917 aa13.18□□□□□ -0.3
SOX2-OT-228ENST00000597828 PFKPQ01813 784 aa13.18□□□□□ -0.3
SOX2-OT-228ENST00000597828 RABEP1Q15276 862 aa13.18□□□□□ -0.3
SOX2-OT-228ENST00000597828 ENOX2Q16206 610 aaKnown RBP13.18□□□□□ -0.3
SOX2-OT-228ENST00000597828 SLC39A4Q6P5W5 647 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms