RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TTYH3Q9C0H2 523 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 TMX1Q9H3N1 280 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 HIPK3Q9H422 1215 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 NXF3Q9H4D5 531 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 UBE2TQ9NPD8 197 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 KLK14Q9P0G3 267 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 FBXL5Q9UKA1 691 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 TBX21Q9UL17 535 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 DERAQ9Y315 318 aa14.07□□□□□ -0.16
SHKBP1-209ENST00000595803 ZNF623O75123 536 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 ZC3H11AO75152 810 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 RECQL4O94761 1208 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 CLSTN1O94985 981 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 NFICP08651 508 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 ACRP10323 421 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 SKILP12757 684 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 MFAP3P55082 362 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 APBA1Q02410 837 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 NCOA4Q13772 614 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 RAPGEF1Q13905 1077 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 MBTPS1Q14703 1052 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 SGSM1Q2NKQ1 1148 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 SFMBT2Q5VUG0 894 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 PPP2R2DQ66LE6 453 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 IQCEQ6IPM2 695 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 PDXDC1Q6P996 788 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 ALKAL1Q6UXT8 129 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 ZNF365Q70YC5 407 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 MRPL10Q7Z7H8 261 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 EFCAB13Q8IY85 973 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 FAM81BQ96LP2 452 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 TRAIPQ9BWF2 469 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 FTHL17Q9BXU8 183 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 STK33Q9BYT3 514 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 PPP1R12CQ9BZL4 782 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 MTMR12Q9C0I1 747 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 RNF39Q9H2S5 420 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 CD320Q9NPF0 282 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 RGS18Q9NS28 235 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 ABHD10Q9NUJ1 306 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 APEX2Q9UBZ4 518 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 C2CD2Q9Y426 696 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 PTPRJQ12913 1337 aa14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 PRRC2BQ5JSZ5 2229 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-209ENST00000595803 USP34Q70CQ2 3546 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 CFAP54Q96N23 3096 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 A0A0U1RQF3 1178 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 MEFVO15553 781 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 XPOTO43592 962 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 MGEA5O60502 916 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 NBNO60934 754 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 LRRN2O75325 713 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 VNN1O95497 513 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 CST3P01034 146 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 KRT19P08727 400 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 IBSPP21815 317 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 RFX1P22670 979 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 STAT1P42224 750 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 CCL23P55773 120 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 RBP5P82980 135 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 ARHGAP44Q17R89 818 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 PHLDB3Q6NSJ2 640 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 GJB7Q6PEY0 223 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 TMTC1Q8IUR5 882 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 BEST2Q8NFU1 509 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 BAP1Q92560 729 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 TATDN2Q93075 761 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 FAM84AQ96KN4 292 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 PI4K2AQ9BTU6 479 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 NAA15Q9BXJ9 866 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 IMPG2Q9BZV3 1241 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 UBN1Q9NPG3 1134 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 C1orf112Q9NSG2 853 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 DPP3Q9NY33 737 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 MYO6Q9UM54 1294 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 COG5Q9UP83 839 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 GIT1Q9Y2X7 761 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 FHOD1Q9Y613 1164 aa14.05□□□□□ -0.16
SHKBP1-209ENST00000595803 SMIM28A0A1B0GU29 152 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 LRRC53A6NM62 1247 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 KCNE1P15382 129 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 CYP2C18P33260 490 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 DRAP1Q14919 205 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 ASIC2Q16515 512 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 PLEKHG4Q58EX7 1191 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 XKR4Q5GH76 650 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 CYP26C1Q6V0L0 522 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 SLC24A5Q71RS6 500 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 RTN4RL1Q86UN2 441 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 ECHDC2Q86YB7 292 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 FMNL3Q8IVF7 1028 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 ARHGEF19Q8IW93 802 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 PPM1KQ8N3J5 372 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 RNF169Q8NCN4 708 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 DBF4BQ8NFT6 615 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 SYN2Q92777 582 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 APBB2Q92870 758 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 SCLYQ96I15 445 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms