RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 TUBGCP4Q9UGJ1 667 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 CIZ1Q9ULV3 898 aaPredicted RBP19.51■□□□□ 0.71
HOMER3-208ENST00000595756 CA14Q9ULX7 337 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 SRPRBQ9Y5M8 271 aaKnown RBP19.51■□□□□ 0.71
HOMER3-208ENST00000595756 MIA3Q5JRA6 1907 aa19.51■□□□□ 0.71
HOMER3-208ENST00000595756 ANK1P16157 1881 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 TTC26A0AVF1 554 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 HNRNPDLO14979 420 aaKnown RBP19.5■□□□□ 0.71
HOMER3-208ENST00000595756 PI15O43692 258 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 GFRA3O60609 400 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 PPP6R2O75170 966 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 ATF2P15336 505 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 RFX1P22670 979 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 ABCD1P33897 745 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 MCM4P33991 863 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 MATR3P43243 847 aaKnown RBP eCLIP19.5■□□□□ 0.71
HOMER3-208ENST00000595756 LIG4P49917 911 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 SEZ6Q53EL9 994 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 ZNF280DQ6N043 979 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 PHLDB3Q6NSJ2 640 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 PARM1Q6UWI2 310 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 NPAS3Q8IXF0 933 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 LINC00301Q8NCQ3 95 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 ITFG1Q8TB96 612 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 RAD54LQ92698 747 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 TBC1D17Q9HA65 648 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 HCFC1R1Q9NWW0 138 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 TFIP11Q9UBB9 837 aaKnown RBP19.5■□□□□ 0.71
HOMER3-208ENST00000595756 ZDHHC9Q9Y397 364 aa19.5■□□□□ 0.71
HOMER3-208ENST00000595756 SPTLC2O15270 562 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 FAM189A1O60320 539 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 FAM13AO94988 1023 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 LRG1P02750 347 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 CYP3A5P20815 502 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 LRPAP1P30533 357 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 DDIT3P35638 169 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 KRT85P78386 507 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 GRIN1Q05586 938 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 PPP2R3AQ06190 1150 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 KARSQ15046 597 aaKnown RBP19.49■□□□□ 0.71
HOMER3-208ENST00000595756 TPGS2Q68CL5 300 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 TCEAL8Q8IYN2 117 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 KRI1Q8N9T8 703 aaKnown RBP19.49■□□□□ 0.71
HOMER3-208ENST00000595756 DTWD2Q8NBA8 298 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 APPL2Q8NEU8 664 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 RASSF8Q8NHQ8 419 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 KCNG4Q8TDN1 519 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 LARP4BQ92615 738 aaKnown RBP19.49■□□□□ 0.71
HOMER3-208ENST00000595756 DDX12PQ92771 950 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 TSPAN18Q96SJ8 248 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 FBXL5Q9UKA1 691 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 TBX20Q9UMR3 447 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 UBQLN1Q9UMX0 589 aaKnown RBP19.49■□□□□ 0.71
HOMER3-208ENST00000595756 PCDHB8Q9UN66 801 aa19.49■□□□□ 0.71
HOMER3-208ENST00000595756 PRRG1O14668 218 aa19.48■□□□□ 0.71
HOMER3-208ENST00000595756 TBCAO75347 108 aaKnown RBP19.48■□□□□ 0.71
HOMER3-208ENST00000595756 MARCKSP29966 332 aaPredicted RBP19.48■□□□□ 0.71
HOMER3-208ENST00000595756 ELF1P32519 619 aa19.48■□□□□ 0.71
HOMER3-208ENST00000595756 TXLNAP40222 546 aa19.48■□□□□ 0.71
HOMER3-208ENST00000595756 MCM6Q14566 821 aa19.48■□□□□ 0.71
HOMER3-208ENST00000595756 CTXN3Q4LDR2 81 aa19.48■□□□□ 0.71
HOMER3-208ENST00000595756 MAP4K3Q8IVH8 894 aa19.48■□□□□ 0.71
HOMER3-208ENST00000595756 MYCT1Q8N699 235 aa19.48■□□□□ 0.71
HOMER3-208ENST00000595756 KIF12Q96FN5 646 aa19.48■□□□□ 0.71
HOMER3-208ENST00000595756 CCSER1Q9C0I3 900 aa19.48■□□□□ 0.71
HOMER3-208ENST00000595756 FBXO2Q9UK22 296 aaPredicted RBP19.48■□□□□ 0.71
HOMER3-208ENST00000595756 MAFFQ9ULX9 164 aa19.48■□□□□ 0.71
HOMER3-208ENST00000595756 MRPS23Q9Y3D9 190 aaKnown RBP19.48■□□□□ 0.71
HOMER3-208ENST00000595756 INSL5Q9Y5Q6 135 aa19.48■□□□□ 0.71
HOMER3-208ENST00000595756 M0QZQ0 153 aa19.47■□□□□ 0.71
HOMER3-208ENST00000595756 OGTO15294 1046 aa19.47■□□□□ 0.71
HOMER3-208ENST00000595756 XPOTO43592 962 aaKnown RBP19.47■□□□□ 0.71
HOMER3-208ENST00000595756 TRAK2O60296 914 aa19.47■□□□□ 0.71
HOMER3-208ENST00000595756 KRT18P05783 430 aaKnown RBP19.47■□□□□ 0.71
HOMER3-208ENST00000595756 RHOP08100 348 aa19.47■□□□□ 0.71
HOMER3-208ENST00000595756 TNFSF9P41273 254 aa19.47■□□□□ 0.71
HOMER3-208ENST00000595756 AARSP49588 968 aaKnown RBP eCLIP19.47■□□□□ 0.71
HOMER3-208ENST00000595756 DNM1Q05193 864 aaKnown RBP19.47■□□□□ 0.71
HOMER3-208ENST00000595756 DHX8Q14562 1220 aaKnown RBP19.47■□□□□ 0.71
HOMER3-208ENST00000595756 ANGPT1Q15389 498 aa19.47■□□□□ 0.71
HOMER3-208ENST00000595756 ZBTB6Q15916 424 aa19.47■□□□□ 0.71
HOMER3-208ENST00000595756 SLC5A9Q2M3M2 681 aa19.47■□□□□ 0.71
HOMER3-208ENST00000595756 FIZ1Q96SL8 496 aa19.47■□□□□ 0.71
HOMER3-208ENST00000595756 RPP25Q9BUL9 199 aaKnown RBP19.47■□□□□ 0.71
HOMER3-208ENST00000595756 OXCT2Q9BYC2 517 aaPredicted RBP19.47■□□□□ 0.71
HOMER3-208ENST00000595756 GDE1Q9NZC3 331 aa19.47■□□□□ 0.71
HOMER3-208ENST00000595756 PATJQ8NI35 1801 aa19.46■□□□□ 0.71
HOMER3-208ENST00000595756 STK25O00506 426 aa19.46■□□□□ 0.71
HOMER3-208ENST00000595756 ADRB2P07550 413 aa19.46■□□□□ 0.71
HOMER3-208ENST00000595756 PTPN2P17706 415 aa19.46■□□□□ 0.71
HOMER3-208ENST00000595756 GTF2BQ00403 316 aa19.46■□□□□ 0.71
HOMER3-208ENST00000595756 ENOX2Q16206 610 aaKnown RBP19.46■□□□□ 0.71
HOMER3-208ENST00000595756 FOXD4L6Q3SYB3 417 aaPredicted RBP19.46■□□□□ 0.71
HOMER3-208ENST00000595756 FOXD4L3Q6VB84 417 aaPredicted RBP19.46■□□□□ 0.71
HOMER3-208ENST00000595756 ST13P5Q8NFI4 369 aaPredicted RBP19.46■□□□□ 0.71
HOMER3-208ENST00000595756 ING5Q8WYH8 240 aa19.46■□□□□ 0.71
HOMER3-208ENST00000595756 SCAND2PQ9GZW5 306 aaPredicted RBP19.46■□□□□ 0.71
HOMER3-208ENST00000595756 CYP4F11Q9HBI6 524 aa19.46■□□□□ 0.71
HOMER3-208ENST00000595756 CCDC39Q9UFE4 941 aa19.46■□□□□ 0.71
HOMER3-208ENST00000595756 AFF4Q9UHB7 1163 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms