RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PARP2Q9UGN5 583 aa22.33■■□□□ 1.17
PNKP-203ENST00000593946 TFRCP02786 760 aaKnown RBP22.32■■□□□ 1.16
PNKP-203ENST00000593946 ACO1P21399 889 aaKnown RBP22.32■■□□□ 1.16
PNKP-203ENST00000593946 ATICP31939 592 aa22.32■■□□□ 1.16
PNKP-203ENST00000593946 USP8P40818 1118 aa22.32■■□□□ 1.16
PNKP-203ENST00000593946 GUCY2FP51841 1108 aa22.32■■□□□ 1.16
PNKP-203ENST00000593946 BMS1Q14692 1282 aaKnown RBP22.32■■□□□ 1.16
PNKP-203ENST00000593946 VPS36Q86VN1 386 aa22.32■■□□□ 1.16
PNKP-203ENST00000593946 FAXDC2Q96IV6 333 aa22.32■■□□□ 1.16
PNKP-203ENST00000593946 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.32■■□□□ 1.16
PNKP-203ENST00000593946 IFIH1Q9BYX4 1025 aaKnown RBP22.32■■□□□ 1.16
PNKP-203ENST00000593946 KLK14Q9P0G3 267 aa22.32■■□□□ 1.16
PNKP-203ENST00000593946 SMIM28A0A1B0GU29 152 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 CYP26A1O43174 497 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 CLSTN1O94985 981 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 HSPA1AP0DMV8 641 aaKnown RBP22.31■■□□□ 1.16
PNKP-203ENST00000593946 HSPA1BP0DMV9 641 aaKnown RBP22.31■■□□□ 1.16
PNKP-203ENST00000593946 POLR2BP30876 1174 aaKnown RBP22.31■■□□□ 1.16
PNKP-203ENST00000593946 ARHGAP25P42331 645 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 VAV2P52735 878 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 BFSP2Q13515 415 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 GLRA4Q5JXX5 417 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 HACE1Q8IYU2 909 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 UBR7Q8N806 425 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 EPS8L1Q8TE68 723 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 LZTFL1Q9NQ48 299 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 NENFQ9UMX5 172 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 CNTN6Q9UQ52 1028 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 PCDHA13Q9Y5I0 950 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 ZNF623O75123 536 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 STAU1O95793 577 aaKnown RBP22.31■■□□□ 1.16
PNKP-203ENST00000593946 SELPP16109 830 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 RAB27AP51159 221 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 RBP5P82980 135 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 SMYD5Q6GMV2 418 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 LRRC8DQ7L1W4 858 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 ANKRD33Q7Z3H0 272 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 MRPL10Q7Z7H8 261 aaKnown RBP22.31■■□□□ 1.16
PNKP-203ENST00000593946 KIAA1328Q86T90 577 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 BEST2Q8NFU1 509 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 SLC30A5Q8TAD4 765 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 TUBGCP4Q9UGJ1 667 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 NOCTQ9UK39 431 aaKnown RBP22.31■■□□□ 1.16
PNKP-203ENST00000593946 UBQLN1Q9UMX0 589 aaKnown RBP22.31■■□□□ 1.16
PNKP-203ENST00000593946 AGAP1Q9UPQ3 857 aa22.31■■□□□ 1.16
PNKP-203ENST00000593946 TDRD15B5MCY1 1934 aaKnown RBP22.3■■□□□ 1.16
PNKP-203ENST00000593946 RCCD1A6NED2 376 aa22.3■■□□□ 1.16
PNKP-203ENST00000593946 PITPNM1O00562 1244 aa22.3■■□□□ 1.16
PNKP-203ENST00000593946 DDX3XO00571 662 aaKnown RBP eCLIP22.3■■□□□ 1.16
PNKP-203ENST00000593946 COL6A1P12109 1028 aa22.3■■□□□ 1.16
PNKP-203ENST00000593946 KRT5P13647 590 aa22.3■■□□□ 1.16
PNKP-203ENST00000593946 ASPAP45381 313 aa22.3■■□□□ 1.16
PNKP-203ENST00000593946 ARHGAP29Q52LW3 1261 aa22.3■■□□□ 1.16
PNKP-203ENST00000593946 SLC39A5Q6ZMH5 540 aa22.3■■□□□ 1.16
PNKP-203ENST00000593946 SLC47A2Q86VL8 602 aa22.3■■□□□ 1.16
PNKP-203ENST00000593946 C18orf25Q96B23 403 aaPredicted RBP22.3■■□□□ 1.16
PNKP-203ENST00000593946 NAGPAQ9UK23 515 aa22.3■■□□□ 1.16
PNKP-203ENST00000593946 A0A0U1RQF3 1178 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 MEIS3P2A8K0S8 358 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 KIF2AO00139 706 aaPredicted RBP22.29■■□□□ 1.16
PNKP-203ENST00000593946 PQBP1O60828 265 aaKnown RBP22.29■■□□□ 1.16
PNKP-203ENST00000593946 ABL1P00519 1130 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 ITGA4P13612 1032 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 TNNT1P13805 278 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 GJA8P48165 433 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 ZNF667Q5HYK9 610 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 NOP9Q86U38 636 aaKnown RBP22.29■■□□□ 1.16
PNKP-203ENST00000593946 GLYCTKQ8IVS8 523 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 LNX1Q8TBB1 728 aaPredicted RBP22.29■■□□□ 1.16
PNKP-203ENST00000593946 SLC20A1Q8WUM9 679 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 AGPAT1Q99943 283 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 ADAM2Q99965 735 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 BCO2Q9BYV7 579 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 LACRTQ9GZZ8 138 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 SCN5AQ14524 2016 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 TET1Q8NFU7 2136 aa22.29■■□□□ 1.16
PNKP-203ENST00000593946 PTGESO14684 152 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 TLR3O15455 904 aaKnown RBP22.28■■□□□ 1.16
PNKP-203ENST00000593946 XPOTO43592 962 aaKnown RBP22.28■■□□□ 1.16
PNKP-203ENST00000593946 CYP11B1P15538 503 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 MAGEA1P43355 309 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 ATN1P54259 1190 aaPredicted RBP22.28■■□□□ 1.16
PNKP-203ENST00000593946 WDR72Q3MJ13 1102 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 C1orf53Q5VUE5 145 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 HPDLQ96IR7 371 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 ACP6Q9NPH0 428 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 TFR2Q9UP52 801 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 R3HCC1Q9Y3T6 440 aaKnown RBP22.28■■□□□ 1.16
PNKP-203ENST00000593946 MYH10P35580 1976 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 ATF7P17544 494 aaPredicted RBP22.28■■□□□ 1.16
PNKP-203ENST00000593946 PDE6CP51160 858 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 NAB2Q15742 525 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 C10orf76Q5T2E6 689 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 ALKBH5Q6P6C2 394 aaKnown RBP22.28■■□□□ 1.16
PNKP-203ENST00000593946 AGMOQ6ZNB7 445 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 ANKLE1Q8NAG6 615 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 ZFP42Q96MM3 310 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 LUC7LQ9NQ29 371 aaKnown RBP22.28■■□□□ 1.16
PNKP-203ENST00000593946 RNF19AQ9NV58 838 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 NXF1Q9UBU9 619 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms