RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 TMEM161BQ8NDZ6 487 aa24.73■■□□□ 1.55
SSBP4-203ENST00000593641 KCND2Q9NZV8 630 aa24.73■■□□□ 1.55
SSBP4-203ENST00000593641 FRYLO94915 3013 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 DMXL1Q9Y485 3027 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 NCAM2O15394 837 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 CLDN3O15551 220 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 KINO60870 393 aaKnown RBP24.72■■□□□ 1.55
SSBP4-203ENST00000593641 MAPTP10636 758 aaKnown RBP24.72■■□□□ 1.55
SSBP4-203ENST00000593641 CD72P21854 359 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 MARCKSP29966 332 aaPredicted RBP24.72■■□□□ 1.55
SSBP4-203ENST00000593641 ATP2C1P98194 919 aaPredicted RBP24.72■■□□□ 1.55
SSBP4-203ENST00000593641 SLC10A6Q3KNW5 377 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 SEZ6Q53EL9 994 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 PRSS36Q5K4E3 855 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 HYIQ5T013 277 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 CYP4A22Q5TCH4 519 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 IQCEQ6IPM2 695 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 SYT2Q8N9I0 419 aaPredicted RBP24.72■■□□□ 1.55
SSBP4-203ENST00000593641 DDX12PQ92771 950 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 TBC1D32Q96NH3 1257 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 NELL2Q99435 816 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 FBXO4Q9UKT5 387 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 MRPS17Q9Y2R5 130 aaKnown RBP24.72■■□□□ 1.55
SSBP4-203ENST00000593641 MTF2Q9Y483 593 aaPredicted RBP24.72■■□□□ 1.55
SSBP4-203ENST00000593641 CEP250Q9BV73 2442 aa24.72■■□□□ 1.55
SSBP4-203ENST00000593641 GPR179Q6PRD1 2367 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 H0YCG3 227 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 SEC24AO95486 1093 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 CPB1P15086 417 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 ADCY1Q08828 1119 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 ZNF528Q3MIS6 628 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 TANGO2Q6ICL3 276 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 ZNF852Q6ZMS4 543 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 MAML2Q8IZL2 1156 aaPredicted RBP24.71■■□□□ 1.55
SSBP4-203ENST00000593641 BICD1Q96G01 975 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 PLIN2Q99541 437 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 PLA2G2FQ9BZM2 168 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 ZFP14Q9HCL3 533 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 TUBGCP4Q9UGJ1 667 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 AFF4Q9UHB7 1163 aaKnown RBP24.71■■□□□ 1.55
SSBP4-203ENST00000593641 MAFFQ9ULX9 164 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 PCDHB8Q9UN66 801 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.71■■□□□ 1.55
SSBP4-203ENST00000593641 CACNA1AO00555 2505 aa24.71■■□□□ 1.55
SSBP4-203ENST00000593641 VWA3AA6NCI4 1184 aa24.7■■□□□ 1.54
SSBP4-203ENST00000593641 MEFVO15553 781 aaPredicted RBP24.7■■□□□ 1.54
SSBP4-203ENST00000593641 MICAL2O94851 1124 aa24.7■■□□□ 1.54
SSBP4-203ENST00000593641 PLA2G4BP0C869 781 aa24.7■■□□□ 1.54
SSBP4-203ENST00000593641 CXCL8P10145 99 aa24.7■■□□□ 1.54
SSBP4-203ENST00000593641 MCL1Q07820 350 aa24.7■■□□□ 1.54
SSBP4-203ENST00000593641 RUBCNQ92622 972 aa24.7■■□□□ 1.54
SSBP4-203ENST00000593641 DNASE1L2Q92874 299 aa24.7■■□□□ 1.54
SSBP4-203ENST00000593641 TCEAL4Q96EI5 215 aa24.7■■□□□ 1.54
SSBP4-203ENST00000593641 ZNF512Q96ME7 567 aaPredicted RBP24.7■■□□□ 1.54
SSBP4-203ENST00000593641 PNMA5Q96PV4 448 aa24.7■■□□□ 1.54
SSBP4-203ENST00000593641 PLEKHA5Q9HAU0 1116 aa24.7■■□□□ 1.54
SSBP4-203ENST00000593641 HEBP1Q9NRV9 189 aa24.7■■□□□ 1.54
SSBP4-203ENST00000593641 LARSQ9P2J5 1176 aaKnown RBP24.7■■□□□ 1.54
SSBP4-203ENST00000593641 H3BQV1 296 aa24.69■■□□□ 1.54
SSBP4-203ENST00000593641 SLC12A3P55017 1021 aa24.69■■□□□ 1.54
SSBP4-203ENST00000593641 YWHAHQ04917 246 aaPredicted RBP24.69■■□□□ 1.54
SSBP4-203ENST00000593641 TWF1Q12792 350 aa24.69■■□□□ 1.54
SSBP4-203ENST00000593641 KIAA2013Q8IYS2 634 aa24.69■■□□□ 1.54
SSBP4-203ENST00000593641 LEMD2Q8NC56 503 aa24.69■■□□□ 1.54
SSBP4-203ENST00000593641 BORCS6Q96GS4 357 aa24.69■■□□□ 1.54
SSBP4-203ENST00000593641 BRD9Q9H8M2 597 aa24.69■■□□□ 1.54
SSBP4-203ENST00000593641 SPTLC1O15269 473 aa24.68■■□□□ 1.54
SSBP4-203ENST00000593641 CLTAP09496 248 aa24.68■■□□□ 1.54
SSBP4-203ENST00000593641 FCARP24071 287 aa24.68■■□□□ 1.54
SSBP4-203ENST00000593641 TARSP26639 723 aaKnown RBP24.68■■□□□ 1.54
SSBP4-203ENST00000593641 CSTF1Q05048 431 aaKnown RBP24.68■■□□□ 1.54
SSBP4-203ENST00000593641 RABEP1Q15276 862 aa24.68■■□□□ 1.54
SSBP4-203ENST00000593641 FAM78AQ5JUQ0 283 aa24.68■■□□□ 1.54
SSBP4-203ENST00000593641 KIF12Q96FN5 646 aa24.68■■□□□ 1.54
SSBP4-203ENST00000593641 ASAH2Q9NR71 780 aa24.68■■□□□ 1.54
SSBP4-203ENST00000593641 TICRRQ7Z2Z1 1910 aa24.68■■□□□ 1.54
SSBP4-203ENST00000593641 XPOTO43592 962 aaKnown RBP24.67■■□□□ 1.54
SSBP4-203ENST00000593641 CCR2P41597 374 aa24.67■■□□□ 1.54
SSBP4-203ENST00000593641 CACNB1Q02641 598 aaPredicted RBP24.67■■□□□ 1.54
SSBP4-203ENST00000593641 PPP2R3AQ06190 1150 aa24.67■■□□□ 1.54
SSBP4-203ENST00000593641 SPAG1Q07617 926 aa24.67■■□□□ 1.54
SSBP4-203ENST00000593641 GRM2Q14416 872 aa24.67■■□□□ 1.54
SSBP4-203ENST00000593641 ARL6IP4Q66PJ3 421 aaKnown RBP24.67■■□□□ 1.54
SSBP4-203ENST00000593641 POTEHQ6S545 545 aa24.67■■□□□ 1.54
SSBP4-203ENST00000593641 CLDN23Q96B33 292 aa24.67■■□□□ 1.54
SSBP4-203ENST00000593641 ASB16Q96NS5 453 aa24.67■■□□□ 1.54
SSBP4-203ENST00000593641 TRMT61BQ9BVS5 477 aaKnown RBP24.67■■□□□ 1.54
SSBP4-203ENST00000593641 OXCT2Q9BYC2 517 aaPredicted RBP24.67■■□□□ 1.54
SSBP4-203ENST00000593641 UBQLN1Q9UMX0 589 aaKnown RBP24.67■■□□□ 1.54
SSBP4-203ENST00000593641 PCDHGA2Q9Y5H1 932 aa24.67■■□□□ 1.54
SSBP4-203ENST00000593641 NPHP3-ACAD11A0A0J9YXS1 232 aa24.66■■□□□ 1.54
SSBP4-203ENST00000593641 MYL4P12829 197 aa24.66■■□□□ 1.54
SSBP4-203ENST00000593641 LRPAP1P30533 357 aa24.66■■□□□ 1.54
SSBP4-203ENST00000593641 RPS9P46781 194 aaKnown RBP24.66■■□□□ 1.54
SSBP4-203ENST00000593641 LIG4P49917 911 aa24.66■■□□□ 1.54
SSBP4-203ENST00000593641 NCKAP1LP55160 1127 aa24.66■■□□□ 1.54
SSBP4-203ENST00000593641 KYAT1Q16773 422 aa24.66■■□□□ 1.54
SSBP4-203ENST00000593641 TMEM119Q4V9L6 283 aa24.66■■□□□ 1.54
SSBP4-203ENST00000593641 ATRIPQ8WXE1 791 aa24.66■■□□□ 1.54
SSBP4-203ENST00000593641 SMARCD2Q92925 531 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms