RNA–Protein interactions for RNA: ENST00000593548.1

FARP1-208, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-208ENST00000593548 PCDHGA8Q9Y5G5 932 aa6.5□□□□□ -1.37
FARP1-208ENST00000593548 PCDHGA7Q9Y5G6 932 aa6.5□□□□□ -1.37
FARP1-208ENST00000593548 PCDHGA6Q9Y5G7 932 aa6.5□□□□□ -1.37
FARP1-208ENST00000593548 PCDHGA3Q9Y5H0 932 aa6.5□□□□□ -1.37
FARP1-208ENST00000593548 SUPT6HQ7KZ85 1726 aaKnown RBP6.5□□□□□ -1.37
FARP1-208ENST00000593548 LRRIQ1Q96JM4 1722 aa6.5□□□□□ -1.37
FARP1-208ENST00000593548 CLTCQ00610 1675 aaKnown RBP6.49□□□□□ -1.37
FARP1-208ENST00000593548 TCOF1Q13428 1488 aaKnown RBP6.49□□□□□ -1.37
FARP1-208ENST00000593548 UNC119BA6NIH7 251 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 AMY1AP04745 511 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 HLA-DOAP06340 250 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 HNRNPMP52272 730 aaKnown RBP eCLIP6.49□□□□□ -1.37
FARP1-208ENST00000593548 MXRA7P84157 204 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 UBXN2BQ14CS0 331 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 ATP2B3Q16720 1220 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 CPEB3Q8NE35 698 aaKnown RBP6.49□□□□□ -1.37
FARP1-208ENST00000593548 LENG9Q96B70 501 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 NEU1Q99519 415 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 TTPALQ9BTX7 342 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 RGS17Q9UGC6 210 aaPredicted RBP6.49□□□□□ -1.37
FARP1-208ENST00000593548 MYO3AQ8NEV4 1616 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 TROQ12816 1431 aaPredicted RBP6.49□□□□□ -1.37
FARP1-208ENST00000593548 NPATQ14207 1427 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 PTPRKQ15262 1439 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 CNTLNQ9NXG0 1405 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 ITSN2Q9NZM3 1697 aa6.49□□□□□ -1.37
FARP1-208ENST00000593548 ALKQ9UM73 1620 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 TCRBV7S2A1N4TA0A589 114 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 TOM1O60784 492 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 RAMP2O60895 175 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 SLC6A2P23975 617 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 MTM1Q13496 603 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 FAM102AQ5T9C2 384 aaPredicted RBP6.48□□□□□ -1.37
FARP1-208ENST00000593548 GGT6Q6P531 493 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 OR56A1Q8NGH5 318 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 CHFRQ96EP1 664 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 MYEOVQ96EZ4 313 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 ZSWIM1Q9BR11 485 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 FBXO34Q9NWN3 711 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 SLC23A1Q9UHI7 598 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 FPGT-TNNI3KV9GXZ4 949 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 ABCC1P33527 1531 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 CEP170BQ9Y4F5 1589 aaPredicted RBP6.48□□□□□ -1.37
FARP1-208ENST00000593548 TNKSO95271 1327 aa6.48□□□□□ -1.37
FARP1-208ENST00000593548 MROH2AA6NES4 1674 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 CENPVL1A0A0U1RR11 272 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 GAGE12BA1L429 117 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 GAGE12HA6NDE8 117 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 TMEM191CA6NGB0 347 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 CCDC154A6NI56 674 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 ALAS1P13196 640 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 DDX6P26196 483 aaKnown RBP eCLIP6.47□□□□□ -1.37
FARP1-208ENST00000593548 ZFP36P26651 326 aaKnown RBP6.47□□□□□ -1.37
FARP1-208ENST00000593548 INHBCP55103 352 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 IL10RAQ13651 578 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 OTUD7BQ6GQQ9 843 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 MRGPRGQ86SM5 289 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 VRK3Q8IV63 474 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 FAM177A1Q8N128 213 aaPredicted RBP6.47□□□□□ -1.37
FARP1-208ENST00000593548 KAT5Q92993 513 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 WDR33Q9C0J8 1336 aaKnown RBP6.47□□□□□ -1.37
FARP1-208ENST00000593548 PLA2R1Q13018 1463 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 ARHGAP35Q9NRY4 1499 aa6.47□□□□□ -1.37
FARP1-208ENST00000593548 ZNF142P52746 1687 aaPredicted RBP6.46□□□□□ -1.37
FARP1-208ENST00000593548 A0A087X1B8 175 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 FZD9O00144 591 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 GUCY1B3Q02153 619 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 DPTQ07507 201 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 RESTQ13127 1097 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 ODF1Q14990 250 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 BEAN1Q3B7T3 259 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 C3orf36Q3SXR2 165 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 SPDYE7PQ495Y7 208 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 AGAP9Q5VTM2 703 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 LAIR1Q6GTX8 287 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 GADL1Q6ZQY3 521 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 SEM1Q6ZVN7 128 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 RHOUQ7L0Q8 258 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 SAMD9LQ8IVG5 1584 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 MAPKAPK5Q8IW41 473 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 RHOT2Q8IXI1 618 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 RPUSD2Q8IZ73 545 aaKnown RBP6.46□□□□□ -1.38
FARP1-208ENST00000593548 AMER2Q8N7J2 671 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 GPATCH3Q96I76 525 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 ASPSCR1Q9BZE9 553 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 C11orf54Q9H0W9 315 aaPredicted RBP6.46□□□□□ -1.38
FARP1-208ENST00000593548 IKZF4Q9H2S9 585 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 GSTO2Q9H4Y5 243 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 CYP4F11Q9HBI6 524 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 RNF181Q9P0P0 153 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 LIMCH1Q9UPQ0 1083 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 NOX1Q9Y5S8 564 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 PREX2Q70Z35 1606 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 SHANK2Q9UPX8 1470 aa6.46□□□□□ -1.38
FARP1-208ENST00000593548 SPAG9O60271 1321 aaKnown RBP6.46□□□□□ -1.38
FARP1-208ENST00000593548 AATKQ6ZMQ8 1374 aa6.45□□□□□ -1.38
FARP1-208ENST00000593548 CDC42BPAQ5VT25 1732 aa6.45□□□□□ -1.38
FARP1-208ENST00000593548 NEURL4Q96JN8 1562 aa6.45□□□□□ -1.38
FARP1-208ENST00000593548 CLIP1P30622 1438 aa6.45□□□□□ -1.38
FARP1-208ENST00000593548 hCG_2014768A0A024R1R8 64 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms