RNA–Protein interactions for RNA: ENST00000592674.1

RPRD1A-211, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-211ENST00000592674 SIX4Q9UIU6 781 aa16.69■□□□□ 0.26
RPRD1A-211ENST00000592674 C5orf67F2Z3F1 127 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 GOLGA6L19H0YKK7 550 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 PIRO00625 290 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 TADA2AO75478 443 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 FGF18O76093 207 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 ITGB1P05556 798 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 PRKCSHP14314 528 aaPredicted RBP16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 CDK11BP21127 795 aaKnown RBP16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 MXI1P50539 228 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 TPM4P67936 248 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 KCNH2Q12809 1159 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 TRPC3Q13507 836 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 ZACNQ401N2 412 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 KRT39Q6A163 491 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 SCARA3Q6AZY7 606 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 C15orf39Q6ZRI6 1047 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 CXorf38Q8TB03 319 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 ARNTL2Q8WYA1 636 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 TMEM169Q96HH4 297 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 ZNF560Q96MR9 790 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 TUBGCP2Q9BSJ2 902 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 C11orf84Q9BUA3 381 aaPredicted RBP16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 HSD3B7Q9H2F3 369 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 ADAM28Q9UKQ2 775 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 CITO14578 2027 aa16.68■□□□□ 0.26
RPRD1A-211ENST00000592674 ANK1P16157 1881 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 GBF1Q92538 1859 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 TMEM189-UBE2V1I3L0A0 370 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 N4BP1O75113 896 aaKnown RBP16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 VNN1O95497 513 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 AFPP02771 609 aaKnown RBP16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 RB1P06400 928 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 ZNF18P17022 549 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 PNPLA4P41247 253 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 PIK3CAP42336 1068 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 FMO5P49326 533 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 MYL7Q01449 175 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 KRT17Q04695 432 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 NCOA4Q13772 614 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 MAN2A1Q16706 1144 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 CBWD6Q4V339 395 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 CBWD3Q5JTY5 395 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 HABP4Q5JVS0 413 aaKnown RBP16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 CBWD5Q5RIA9 395 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 CD300LGQ6UXG3 332 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 LRRC52Q8N7C0 313 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 RNF214Q8ND24 703 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 ANKRD20A12PQ8NF67 263 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 LRCH3Q96II8 777 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 ZNF576Q9H609 170 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 TAB2Q9NYJ8 693 aa16.67■□□□□ 0.26
RPRD1A-211ENST00000592674 TDRD15B5MCY1 1934 aaKnown RBP16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 TMEM265A0A087WTH1 108 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 CLSTN1O94985 981 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 CST3P01034 146 aaPredicted RBP16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 HLA-DRAP01903 254 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 TPM2P07951 284 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 ATP1A3P13637 1013 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 BRCC3P46736 316 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 TAF6P49848 677 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 LILRA4P59901 499 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 MYL6P60660 151 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 PLCB3Q01970 1234 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 MYO1EQ12965 1108 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 KRT31Q15323 416 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 SV2CQ496J9 727 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 VWA3BQ502W6 1294 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 FUT10Q6P4F1 479 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 TAS1R2Q8TE23 839 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 HPDLQ96IR7 371 aa16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 ALG13Q9NP73 1137 aaKnown RBP16.66■□□□□ 0.26
RPRD1A-211ENST00000592674 SF3B1O75533 1304 aaKnown RBP eCLIP16.66■□□□□ 0.262e-6■■■■■ 43.3
RPRD1A-211ENST00000592674 PDCD11Q14690 1871 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 RANBP2P49792 3224 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 H3BNC9 293 aa16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 I3L4J1 428 aa16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 PES1O00541 588 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 SPTLC1O15269 473 aa16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 TRAPPC3O43617 180 aa16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 PAX3P23760 479 aa16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 GPM6BQ13491 265 aa16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 DDX53Q86TM3 631 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 FBXL13Q8NEE6 735 aa16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 VN1R3Q9BXE9 311 aa16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 GPR62Q9BZJ7 368 aa16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 NDST4Q9H3R1 872 aa16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 LIMA1Q9UHB6 759 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 KIAA1671Q9BY89 1806 aa16.65■□□□□ 0.26
RPRD1A-211ENST00000592674 EPOPA6NHQ4 379 aa16.64■□□□□ 0.25
RPRD1A-211ENST00000592674 KPNA7A9QM74 516 aa16.64■□□□□ 0.25
RPRD1A-211ENST00000592674 ATICP31939 592 aa16.64■□□□□ 0.25
RPRD1A-211ENST00000592674 AARSP49588 968 aaKnown RBP eCLIP16.64■□□□□ 0.25
RPRD1A-211ENST00000592674 CETN1Q12798 172 aa16.64■□□□□ 0.25
RPRD1A-211ENST00000592674 ELAVL2Q12926 359 aaKnown RBP16.64■□□□□ 0.25
RPRD1A-211ENST00000592674 SGSM1Q2NKQ1 1148 aa16.64■□□□□ 0.25
RPRD1A-211ENST00000592674 ZNF699Q32M78 642 aa16.64■□□□□ 0.25
RPRD1A-211ENST00000592674 TIGD5Q53EQ6 642 aa16.64■□□□□ 0.25
RPRD1A-211ENST00000592674 MIIPQ5JXC2 388 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms