RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 PLEKHA8P1O95397 391 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 MMP3P08254 477 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 CYP2C9P11712 490 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 RXRAP19793 462 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 CCL23P55773 120 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 SP2Q02086 613 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 PPIGQ13427 754 aaKnown RBP eCLIP8.61□□□□□ -1.031e-9■■□□□ 11.8
VMP1-213ENST00000591877 SART3Q15020 963 aaKnown RBP8.61□□□□□ -1.03
VMP1-213ENST00000591877 PLCL1Q15111 1095 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 PGM5Q15124 567 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 PKN1Q16512 942 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 CT47A1Q5JQC4 288 aaPredicted RBP8.61□□□□□ -1.03
VMP1-213ENST00000591877 ZNF574Q6ZN55 896 aaPredicted RBP8.61□□□□□ -1.03
VMP1-213ENST00000591877 ZNF365Q70YC5 407 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 CATIPQ7Z7H3 387 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 FERMT3Q86UX7 667 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 LRRTM3Q86VH5 581 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 TMEM199Q8N511 208 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 SRBD1Q8N5C6 995 aaKnown RBP8.61□□□□□ -1.03
VMP1-213ENST00000591877 AFG1LQ8WV93 481 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 KAT2BQ92831 832 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 CLUHP3Q96NS8 147 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 MAP3K14Q99558 947 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 MTA3Q9BTC8 594 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 SPZ1Q9BXG8 430 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 SEZ6LQ9BYH1 1024 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 LRRC2Q9BYS8 371 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 HIPK3Q9H422 1215 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 IL23AQ9NPF7 189 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 AKT3Q9Y243 479 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 STXBP5LQ9Y2K9 1186 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 PTPRSQ13332 1948 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.6□□□□□ -1.03
VMP1-213ENST00000591877 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.6□□□□□ -1.03
VMP1-213ENST00000591877 GRXCR1A8MXD5 290 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 RBAK-RBAKDNI3L0D1 243 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 BIN1O00499 593 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 NPTXRO95502 500 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 GH1P01241 217 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 MYCLP12524 364 aaPredicted RBP8.6□□□□□ -1.03
VMP1-213ENST00000591877 POU3F2P20265 443 aaPredicted RBP8.6□□□□□ -1.03
VMP1-213ENST00000591877 MCM5P33992 734 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 GABREP78334 506 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 EXOSC10Q01780 885 aaKnown RBP8.6□□□□□ -1.03
VMP1-213ENST00000591877 MAP4K2Q12851 820 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 ADCK5Q3MIX3 580 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 RAB11FIP4Q86YS3 637 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 SAMD3Q8N6K7 520 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 PIBF1Q8WXW3 757 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 EZH1Q92800 747 aaPredicted RBP8.6□□□□□ -1.03
VMP1-213ENST00000591877 GATA6Q92908 595 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 SCLYQ96I15 445 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 CTAGE1Q96RT6 745 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 MIPEPQ99797 713 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 BCAS3Q9H6U6 928 aa8.6□□□□□ -1.03
VMP1-213ENST00000591877 CGGBP1Q9UFW8 167 aaPredicted RBP8.6□□□□□ -1.03
VMP1-213ENST00000591877 FRMPD4Q14CM0 1322 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 GCOM1H8Y6P7 765 aaPredicted RBP8.59□□□□□ -1.03
VMP1-213ENST00000591877 MEIS2O14770 477 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 KPNA6O60684 536 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 PARNO95453 639 aaKnown RBP8.59□□□□□ -1.03
VMP1-213ENST00000591877 POLR2MP0CAP2 368 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 CPEP16870 476 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 SMARCA1P28370 1054 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 LIFRP42702 1097 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 MRPS9P82933 396 aaKnown RBP8.59□□□□□ -1.03
VMP1-213ENST00000591877 BRDTQ58F21 947 aaPredicted RBP8.59□□□□□ -1.03
VMP1-213ENST00000591877 NFRKBQ6P4R8 1299 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 USP17L6PQ6QN14 398 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 CASC1Q6TDU7 716 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 SGMS1Q86VZ5 419 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 AHI1Q8N157 1196 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 TMTC2Q8N394 836 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 AFAP1L2Q8N4X5 818 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 GSTCDQ8NEC7 633 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 CTCFLQ8NI51 663 aaPredicted RBP8.59□□□□□ -1.03
VMP1-213ENST00000591877 KCTD13Q8WZ19 329 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 HERVK_113Q902F9 699 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 CDX2Q99626 313 aaPredicted RBP8.59□□□□□ -1.03
VMP1-213ENST00000591877 IER2Q9BTL4 223 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 TARS2Q9BW92 718 aaKnown RBP8.59□□□□□ -1.03
VMP1-213ENST00000591877 SEMA6CQ9H3T2 930 aa8.59□□□□□ -1.03
VMP1-213ENST00000591877 hCG_1642624A0A1W2PR95 340 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 CCDC69A6NI79 296 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 HAS3O00219 553 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 SLITRK5O94991 958 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 GGPS1O95749 300 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 FGBP02675 491 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 SUPT20HL2P0C7V6 817 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 UBA1P22314 1058 aaKnown RBP8.58□□□□□ -1.04
VMP1-213ENST00000591877 HOXC12P31275 282 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 KIF5BP33176 963 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 GRIA2P42262 883 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 CDKN1CP49918 316 aaPredicted RBP8.58□□□□□ -1.04
VMP1-213ENST00000591877 NFKB2Q00653 900 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 TRAF1Q13077 416 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 GPNMBQ14956 572 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 HSDL1Q3SXM5 330 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 FAM47CQ5HY64 1035 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 CELF3Q5SZQ8 465 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms