RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 VARS2Q5ST30 1063 aaKnown RBP24.26■■□□□ 1.47
MBD3-208ENST00000590830 PDXDC1Q6P996 788 aa24.26■■□□□ 1.47
MBD3-208ENST00000590830 FSIP1Q8NA03 581 aa24.26■■□□□ 1.47
MBD3-208ENST00000590830 CMASQ8NFW8 434 aaPredicted RBP24.26■■□□□ 1.47
MBD3-208ENST00000590830 HDAC7Q8WUI4 952 aa24.26■■□□□ 1.47
MBD3-208ENST00000590830 SCFD1Q8WVM8 642 aa24.26■■□□□ 1.47
MBD3-208ENST00000590830 USP25Q9UHP3 1055 aa24.26■■□□□ 1.47
MBD3-208ENST00000590830 DERAQ9Y315 318 aa24.26■■□□□ 1.47
MBD3-208ENST00000590830 BACE2Q9Y5Z0 518 aa24.26■■□□□ 1.47
MBD3-208ENST00000590830 PLXNA3P51805 1871 aa24.26■■□□□ 1.47
MBD3-208ENST00000590830 CCDC195A0A1B0GUA6 201 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 PI4K2BG5E9Z4 385 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 EIF3DO15371 548 aaKnown RBP eCLIP24.25■■□□□ 1.47
MBD3-208ENST00000590830 TGFB1I1O43294 461 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 PAPLNO95428 1278 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 MTHFRP42898 656 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 SYKP43405 635 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 RAB33AQ14088 237 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 TMEM132DQ14C87 1099 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 EFCAB13Q8IY85 973 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 KREMEN2Q8NCW0 462 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 ZNF707Q96C28 371 aaPredicted RBP24.25■■□□□ 1.47
MBD3-208ENST00000590830 RIPOR3Q96MK2 946 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 PLEKHA4Q9H4M7 779 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 SLC39A2Q9NP94 309 aa24.25■■□□□ 1.47
MBD3-208ENST00000590830 PDCD11Q14690 1871 aaKnown RBP24.25■■□□□ 1.47
MBD3-208ENST00000590830 TCHHQ07283 1943 aa24.24■■□□□ 1.47
MBD3-208ENST00000590830 SYN3O14994 580 aa24.24■■□□□ 1.47
MBD3-208ENST00000590830 MCM4P33991 863 aa24.24■■□□□ 1.47
MBD3-208ENST00000590830 AARSP49588 968 aaKnown RBP eCLIP24.24■■□□□ 1.47
MBD3-208ENST00000590830 C9orf57Q5W0N0 161 aa24.24■■□□□ 1.47
MBD3-208ENST00000590830 ANKS3Q6ZW76 656 aa24.24■■□□□ 1.47
MBD3-208ENST00000590830 STXBP4Q6ZWJ1 553 aa24.24■■□□□ 1.47
MBD3-208ENST00000590830 RNF135Q8IUD6 432 aa24.24■■□□□ 1.47
MBD3-208ENST00000590830 BEST2Q8NFU1 509 aa24.24■■□□□ 1.47
MBD3-208ENST00000590830 NECTIN4Q96NY8 510 aa24.24■■□□□ 1.47
MBD3-208ENST00000590830 FBXW11Q9UKB1 542 aa24.24■■□□□ 1.47
MBD3-208ENST00000590830 C2CD2Q9Y426 696 aa24.24■■□□□ 1.47
MBD3-208ENST00000590830 CDY1Q9Y6F8 540 aa24.24■■□□□ 1.47
MBD3-208ENST00000590830 ANO9A1A5B4 782 aa24.23■■□□□ 1.47
MBD3-208ENST00000590830 M0QZQ0 153 aa24.23■■□□□ 1.47
MBD3-208ENST00000590830 PIRO00625 290 aa24.23■■□□□ 1.47
MBD3-208ENST00000590830 SPTLC1O15269 473 aa24.23■■□□□ 1.47
MBD3-208ENST00000590830 XPOTO43592 962 aaKnown RBP24.23■■□□□ 1.47
MBD3-208ENST00000590830 EXTL3O43909 919 aa24.23■■□□□ 1.47
MBD3-208ENST00000590830 SP100P23497 879 aaPredicted RBP24.23■■□□□ 1.47
MBD3-208ENST00000590830 SCARA3Q6AZY7 606 aa24.23■■□□□ 1.47
MBD3-208ENST00000590830 C15orf39Q6ZRI6 1047 aa24.23■■□□□ 1.47
MBD3-208ENST00000590830 BRSK2Q8IWQ3 736 aa24.23■■□□□ 1.47
MBD3-208ENST00000590830 NELFCDQ8IXH7 590 aa24.23■■□□□ 1.47
MBD3-208ENST00000590830 FAM84AQ96KN4 292 aa24.23■■□□□ 1.47
MBD3-208ENST00000590830 PCDHB8Q9UN66 801 aa24.23■■□□□ 1.47
MBD3-208ENST00000590830 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.23■■□□□ 1.47
MBD3-208ENST00000590830 SPDYE4A6NLX3 237 aa24.22■■□□□ 1.47
MBD3-208ENST00000590830 LDHAP00338 332 aaKnown RBP24.22■■□□□ 1.47
MBD3-208ENST00000590830 PRR29P0C7W0 189 aa24.22■■□□□ 1.47
MBD3-208ENST00000590830 LILRA4P59901 499 aa24.22■■□□□ 1.47
MBD3-208ENST00000590830 STK4Q13043 487 aa24.22■■□□□ 1.47
MBD3-208ENST00000590830 KMT5BQ4FZB7 885 aa24.22■■□□□ 1.47
MBD3-208ENST00000590830 SLC8B1Q6J4K2 584 aa24.22■■□□□ 1.47
MBD3-208ENST00000590830 ARMCX5Q6P1M9 558 aa24.22■■□□□ 1.47
MBD3-208ENST00000590830 DPP7Q9UHL4 492 aa24.22■■□□□ 1.47
MBD3-208ENST00000590830 TIMM13Q9Y5L4 95 aaPredicted RBP24.22■■□□□ 1.47
MBD3-208ENST00000590830 ZMYND10O75800 440 aa24.21■■□□□ 1.47
MBD3-208ENST00000590830 IL18RAPO95256 599 aa24.21■■□□□ 1.47
MBD3-208ENST00000590830 BMT2Q1RMZ1 405 aa24.21■■□□□ 1.47
MBD3-208ENST00000590830 GPD1LQ8N335 351 aa24.21■■□□□ 1.47
MBD3-208ENST00000590830 RHOBTB2Q9BYZ6 727 aa24.21■■□□□ 1.47
MBD3-208ENST00000590830 AGPAT3Q9NRZ7 376 aa24.21■■□□□ 1.47
MBD3-208ENST00000590830 DPP3Q9NY33 737 aa24.21■■□□□ 1.47
MBD3-208ENST00000590830 RBAKQ9NYW8 714 aaPredicted RBP24.21■■□□□ 1.47
MBD3-208ENST00000590830 HSPBP1Q9NZL4 362 aa24.21■■□□□ 1.47
MBD3-208ENST00000590830 MUTYHQ9UIF7 546 aa24.21■■□□□ 1.47
MBD3-208ENST00000590830 FBXL5Q9UKA1 691 aa24.21■■□□□ 1.47
MBD3-208ENST00000590830 C2CD4DB7Z1M9 353 aa24.2■■□□□ 1.46
MBD3-208ENST00000590830 ZNF202O95125 648 aa24.2■■□□□ 1.46
MBD3-208ENST00000590830 KRBA2Q6ZNG9 492 aa24.2■■□□□ 1.46
MBD3-208ENST00000590830 CBWD2Q8IUF1 395 aa24.2■■□□□ 1.46
MBD3-208ENST00000590830 KIAA0895Q8NCT3 520 aa24.2■■□□□ 1.46
MBD3-208ENST00000590830 PRKD2Q9BZL6 878 aa24.2■■□□□ 1.46
MBD3-208ENST00000590830 PDE11AQ9HCR9 933 aa24.2■■□□□ 1.46
MBD3-208ENST00000590830 TSHZ2Q9NRE2 1034 aa24.2■■□□□ 1.46
MBD3-208ENST00000590830 ZDHHC7Q9NXF8 308 aa24.2■■□□□ 1.46
MBD3-208ENST00000590830 ANK1P16157 1881 aa24.19■■□□□ 1.46
MBD3-208ENST00000590830 UBE4BO95155 1302 aa24.19■■□□□ 1.46
MBD3-208ENST00000590830 CLIC2O15247 247 aa24.19■■□□□ 1.46
MBD3-208ENST00000590830 ROR1Q01973 937 aa24.19■■□□□ 1.46
MBD3-208ENST00000590830 ELMSAN1Q6PJG2 1045 aa24.19■■□□□ 1.46
MBD3-208ENST00000590830 APPL2Q8NEU8 664 aa24.19■■□□□ 1.46
MBD3-208ENST00000590830 NOC3LQ8WTT2 800 aaKnown RBP24.19■■□□□ 1.46
MBD3-208ENST00000590830 SMG7Q92540 1137 aaKnown RBP24.19■■□□□ 1.46
MBD3-208ENST00000590830 BORCS6Q96GS4 357 aa24.19■■□□□ 1.46
MBD3-208ENST00000590830 C11orf16Q9NQ32 467 aa24.19■■□□□ 1.46
MBD3-208ENST00000590830 WDR27A2RRH5 827 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 H7C4K7 107 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 TULP1O00294 542 aaPredicted RBP24.18■■□□□ 1.46
MBD3-208ENST00000590830 KIAA0391O15091 583 aaKnown RBP24.18■■□□□ 1.46
MBD3-208ENST00000590830 DCXO43602 365 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 ABLIM3O94929 683 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 OAZ2O95190 189 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms