RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 R3HCC1Q9Y3T6 440 aaKnown RBP19.44■□□□□ 0.7
CTDP1-205ENST00000590599 IPPQ9Y573 584 aa19.44■□□□□ 0.7
CTDP1-205ENST00000590599 NUB1Q9Y5A7 615 aa19.44■□□□□ 0.7
CTDP1-205ENST00000590599 A0A087X0T9 212 aa19.43■□□□□ 0.7
CTDP1-205ENST00000590599 ITGB3P05106 788 aa19.43■□□□□ 0.7
CTDP1-205ENST00000590599 FAM228BP0C875 321 aa19.43■□□□□ 0.7
CTDP1-205ENST00000590599 GHRP10912 638 aa19.43■□□□□ 0.7
CTDP1-205ENST00000590599 SYN1P17600 705 aa19.43■□□□□ 0.7
CTDP1-205ENST00000590599 AKAP5P24588 427 aa19.43■□□□□ 0.7
CTDP1-205ENST00000590599 MAGEA1P43355 309 aa19.43■□□□□ 0.7
CTDP1-205ENST00000590599 BMS1Q14692 1282 aaKnown RBP19.43■□□□□ 0.7
CTDP1-205ENST00000590599 ZNF618Q5T7W0 954 aa19.43■□□□□ 0.7
CTDP1-205ENST00000590599 TAF4BQ92750 862 aa19.43■□□□□ 0.7
CTDP1-205ENST00000590599 NIF3L1Q9GZT8 377 aa19.43■□□□□ 0.7
CTDP1-205ENST00000590599 PARP2Q9UGN5 583 aa19.43■□□□□ 0.7
CTDP1-205ENST00000590599 ITGA11Q9UKX5 1188 aa19.43■□□□□ 0.7
CTDP1-205ENST00000590599 ZMYND8Q9ULU4 1186 aaPredicted RBP19.43■□□□□ 0.7
CTDP1-205ENST00000590599 CYP26A1O43174 497 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 CKBP12277 381 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 ZSCAN20P17040 1043 aaPredicted RBP19.42■□□□□ 0.7
CTDP1-205ENST00000590599 CD52P31358 61 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 ARHGAP25P42331 645 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 LPIN1Q14693 890 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 CCDC122Q5T0U0 273 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 SCARA3Q6AZY7 606 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 USP38Q8NB14 1042 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 TSGA10Q9BZW7 698 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 AGO3Q9H9G7 860 aaKnown RBP19.42■□□□□ 0.7
CTDP1-205ENST00000590599 ERVK-5Q9HDB9 667 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 DPP3Q9NY33 737 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 SIX4Q9UIU6 781 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 PADI3Q9ULW8 664 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 UMODL1Q5DID0 1318 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 TRIP11Q15643 1979 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 KRT86O43790 486 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 KIF5CO60282 957 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 ETF1P62495 437 aaKnown RBP19.42■□□□□ 0.7
CTDP1-205ENST00000590599 KIF5AQ12840 1032 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 PDCD11Q14690 1871 aaKnown RBP19.42■□□□□ 0.7
CTDP1-205ENST00000590599 ZNF662Q6ZS27 426 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 HACE1Q8IYU2 909 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 SMG8Q8ND04 991 aaKnown RBP19.42■□□□□ 0.7
CTDP1-205ENST00000590599 ZNF592Q92610 1267 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 XYLT2Q9H1B5 865 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 CNTN3Q9P232 1028 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 COLQQ9Y215 455 aaPredicted RBP19.42■□□□□ 0.7
CTDP1-205ENST00000590599 PCDHB2Q9Y5E7 798 aa19.42■□□□□ 0.7
CTDP1-205ENST00000590599 POLR2BP30876 1174 aaKnown RBP19.41■□□□□ 0.7
CTDP1-205ENST00000590599 PDE6CP51160 858 aa19.41■□□□□ 0.7
CTDP1-205ENST00000590599 C10orf76Q5T2E6 689 aa19.41■□□□□ 0.7
CTDP1-205ENST00000590599 AGPAT1Q99943 283 aa19.41■□□□□ 0.7
CTDP1-205ENST00000590599 FAM105AQ9NUU6 356 aa19.41■□□□□ 0.7
CTDP1-205ENST00000590599 SEPT11Q9NVA2 429 aaKnown RBP19.41■□□□□ 0.7
CTDP1-205ENST00000590599 TFR2Q9UP52 801 aa19.41■□□□□ 0.7
CTDP1-205ENST00000590599 SQORQ9Y6N5 450 aa19.41■□□□□ 0.7
CTDP1-205ENST00000590599 TRIOBPQ9H2D6 2365 aa19.41■□□□□ 0.7
CTDP1-205ENST00000590599 TNFAIP3P21580 790 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 ATICP31939 592 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 GUCY2FP51841 1108 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 GNG11P61952 73 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 RBP5P82980 135 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 ZNF667Q5HYK9 610 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 ALKAL1Q6UXT8 129 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 GLYCTKQ8IVS8 523 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 BEST2Q8NFU1 509 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 CAGE1Q8TC20 777 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 EPS8L1Q8TE68 723 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 ZMAT2Q96NC0 199 aaKnown RBP19.4■□□□□ 0.7
CTDP1-205ENST00000590599 TSPAN18Q96SJ8 248 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 SYT11Q9BT88 431 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 RNF39Q9H2S5 420 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 KLK14Q9P0G3 267 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 NAGPAQ9UK23 515 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 GUCA1BQ9UMX6 200 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 PCDHB4Q9Y5E5 795 aa19.4■□□□□ 0.7
CTDP1-205ENST00000590599 RCCD1A6NED2 376 aa19.39■□□□□ 0.7
CTDP1-205ENST00000590599 DDX3XO00571 662 aaKnown RBP eCLIP19.39■□□□□ 0.7
CTDP1-205ENST00000590599 ACO1P21399 889 aaKnown RBP19.39■□□□□ 0.7
CTDP1-205ENST00000590599 CDK7P50613 346 aa19.39■□□□□ 0.7
CTDP1-205ENST00000590599 GLRA4Q5JXX5 417 aa19.39■□□□□ 0.7
CTDP1-205ENST00000590599 ALKBH5Q6P6C2 394 aaKnown RBP19.39■□□□□ 0.7
CTDP1-205ENST00000590599 CHRDL2Q6WN34 429 aa19.39■□□□□ 0.7
CTDP1-205ENST00000590599 SYT10Q6XYQ8 523 aa19.39■□□□□ 0.7
CTDP1-205ENST00000590599 SLC47A2Q86VL8 602 aa19.39■□□□□ 0.7
CTDP1-205ENST00000590599 SLC20A1Q8WUM9 679 aa19.39■□□□□ 0.7
CTDP1-205ENST00000590599 OSBPL7Q9BZF2 842 aa19.39■□□□□ 0.7
CTDP1-205ENST00000590599 LACRTQ9GZZ8 138 aa19.39■□□□□ 0.7
CTDP1-205ENST00000590599 CXCL16Q9H2A7 254 aa19.39■□□□□ 0.7
CTDP1-205ENST00000590599 NXF1Q9UBU9 619 aaKnown RBP19.39■□□□□ 0.7
CTDP1-205ENST00000590599 TRIM10Q9UDY6 481 aa19.39■□□□□ 0.7
CTDP1-205ENST00000590599 UBQLN1Q9UMX0 589 aaKnown RBP19.39■□□□□ 0.7
CTDP1-205ENST00000590599 AGAP1Q9UPQ3 857 aa19.39■□□□□ 0.7
CTDP1-205ENST00000590599 XPOTO43592 962 aaKnown RBP19.39■□□□□ 0.69
CTDP1-205ENST00000590599 CYP11B1P15538 503 aa19.39■□□□□ 0.69
CTDP1-205ENST00000590599 RAB27AP51159 221 aa19.39■□□□□ 0.69
CTDP1-205ENST00000590599 BPIFB4P59827 614 aa19.39■□□□□ 0.69
CTDP1-205ENST00000590599 NAB2Q15742 525 aa19.39■□□□□ 0.69
CTDP1-205ENST00000590599 SCARA5Q6ZMJ2 495 aa19.39■□□□□ 0.69
CTDP1-205ENST00000590599 NOP9Q86U38 636 aaKnown RBP19.39■□□□□ 0.69
CTDP1-205ENST00000590599 FAM126BQ8IXS8 530 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms