RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 F5H423 210 aaPredicted RBP18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 LCA5LO95447 670 aa18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 IFI35P80217 286 aaPredicted RBP18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 ASPHQ12797 758 aa18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 IRF2BP2Q7Z5L9 587 aa18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 LONP2Q86WA8 852 aa18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 TMX2Q9Y320 296 aa18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 TRAPPC3O43617 180 aa18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 TLR2O60603 784 aa18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 BAG6P46379 1132 aa18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 NFX1Q12986 1120 aaKnown RBP18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 SLC5A5Q92911 643 aa18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 FAM53CQ9NYF3 392 aa18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 FRMPD4Q14CM0 1322 aa18.08■□□□□ 0.48
SMARCA4-215ENST00000590574 CYP3A7-CYP3A51PA0A087WV96 503 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 FANCGO15287 622 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 CYP3A7P24462 503 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 DALRD3Q5D0E6 543 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 RNF149Q8NC42 400 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 OR6B3Q8NGW1 331 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 UBN1Q9NPG3 1134 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 BCL9LQ86UU0 1499 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 RRM1P23921 792 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 GTF2H1P32780 548 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 PIGHQ14442 188 aaPredicted RBP18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 EIF1ADQ8N9N8 165 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 CCT6BQ92526 530 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 FOXP3Q9BZS1 431 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 PIK3R2O00459 728 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 KCNQ5Q9NR82 932 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 ROBO3Q96MS0 1386 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 DNAJC3Q13217 504 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 MYBPC2Q14324 1141 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 SMTNL2Q2TAL5 461 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 PSTPIP1O43586 416 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 NOL4O94818 638 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 KLF6Q99612 283 aaPredicted RBP18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 C2orf40Q9H1Z8 148 aa18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 XPO7Q9UIA9 1087 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 CNOT7Q9UIV1 285 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-215ENST00000590574 PPP1R11O60927 126 aaPredicted RBP18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 VIL1P09327 827 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 BCAR1P56945 870 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 CUL2Q13617 745 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 ARSHQ5FYA8 562 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 C1orf186Q6ZWK4 172 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 RIBC1Q8N443 379 aaPredicted RBP18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 TISP43B9A030 160 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 NFIBO00712 420 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 PRKCBP05771 671 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 WDR72Q3MJ13 1102 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 LVRNQ6Q4G3 990 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 PTF1AQ7RTS3 328 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 WDR75Q8IWA0 830 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 G3BP2Q9UN86 482 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 C5P01031 1676 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 CCND1P24385 295 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 FOXR2Q6PJQ5 311 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 RFX8Q6ZV50 586 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 Q9H521 79 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 SLC24A3Q9HC58 644 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 BRD2P25440 801 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 SDC4P31431 198 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 DLG4P78352 724 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 KRT35Q92764 455 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 FAM161BQ96MY7 647 aa18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 AGO4Q9HCK5 861 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-215ENST00000590574 POLRMTO00411 1230 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 RARAP10276 462 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 STAT5BP51692 787 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 EFNA5P52803 228 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 PRPSAP1Q14558 356 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 CLEC16AQ2KHT3 1053 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 CYP4A22Q5TCH4 519 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 GPAT2Q6NUI2 795 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 C3orf62Q6ZUJ4 267 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 NUDCD3Q8IVD9 361 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 AGGF1Q8N302 714 aaeCLIP18.05■□□□□ 0.484e-6■■■■□ 20.3
SMARCA4-215ENST00000590574 FBXO40Q9UH90 709 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 TPD52P55327 224 aaPredicted RBP18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 TATDN2Q93075 761 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 TARS2Q9BW92 718 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 PABPN1LA6NDY0 278 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 M0QZ92 97 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 ZWINTO95229 277 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 SHBGP04278 402 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 WEE2P0C1S8 567 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 SPATA31C1P0DKV0 1188 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 NQO1P15559 274 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 CAP2P40123 477 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 MARSP56192 900 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 TNFAIP2Q03169 654 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 HIPK4Q8NE63 616 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 TSSK1BQ9BXA7 367 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 YIPF3Q9GZM5 350 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 ATF5Q9Y2D1 282 aaPredicted RBP18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 NOL3O60936 208 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 KRT10P13645 584 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 SOX10P56693 466 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 SEZ6Q53EL9 994 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms