RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 FIZ1Q96SL8 496 aa12.15□□□□□ -0.46
DDX39A-210ENST00000589675 ST6GALNAC4Q9H4F1 302 aa12.15□□□□□ -0.46
DDX39A-210ENST00000589675 FAM86C1Q9NVL1 165 aa12.15□□□□□ -0.46
DDX39A-210ENST00000589675 HCFC1R1Q9NWW0 138 aa12.15□□□□□ -0.46
DDX39A-210ENST00000589675 FBXL5Q9UKA1 691 aa12.15□□□□□ -0.46
DDX39A-210ENST00000589675 UBQLN1Q9UMX0 589 aaKnown RBP12.15□□□□□ -0.46
DDX39A-210ENST00000589675 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
DDX39A-210ENST00000589675 POLIQ9UNA4 740 aa12.15□□□□□ -0.46
DDX39A-210ENST00000589675 CACNA1IQ9P0X4 2223 aa12.15□□□□□ -0.46
DDX39A-210ENST00000589675 MIA3Q5JRA6 1907 aa12.15□□□□□ -0.46
DDX39A-210ENST00000589675 PRRG1O14668 218 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 HNRNPDLO14979 420 aaKnown RBP12.14□□□□□ -0.47
DDX39A-210ENST00000589675 XPOTO43592 962 aaKnown RBP12.14□□□□□ -0.47
DDX39A-210ENST00000589675 TRAK2O60296 914 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 GFRA3O60609 400 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 FAM13AO94988 1023 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 OAZ2O95190 189 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 LRG1P02750 347 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 RHOP08100 348 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 MCM4P33991 863 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 MATR3P43243 847 aaKnown RBP eCLIP12.14□□□□□ -0.47
DDX39A-210ENST00000589675 AARSP49588 968 aaKnown RBP eCLIP12.14□□□□□ -0.472e-6■■■■■ 30.9
DDX39A-210ENST00000589675 LIG4P49917 911 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 POU5F1Q01860 360 aaKnown RBP12.14□□□□□ -0.47
DDX39A-210ENST00000589675 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
DDX39A-210ENST00000589675 GRIN1Q05586 938 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 PPP2R3AQ06190 1150 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 MCM6Q14566 821 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 KARSQ15046 597 aaKnown RBP12.14□□□□□ -0.47
DDX39A-210ENST00000589675 CTXN3Q4LDR2 81 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 SEZ6Q53EL9 994 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 ZNF280DQ6N043 979 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 NPAS3Q8IXF0 933 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 LARP4BQ92615 738 aaKnown RBP12.14□□□□□ -0.47
DDX39A-210ENST00000589675 SHDQ96IW2 340 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 RPP25Q9BUL9 199 aaKnown RBP12.14□□□□□ -0.47
DDX39A-210ENST00000589675 TBC1D17Q9HA65 648 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 ARHGEF3Q9NR81 526 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 TUBGCP4Q9UGJ1 667 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 AFF4Q9UHB7 1163 aaKnown RBP12.14□□□□□ -0.47
DDX39A-210ENST00000589675 CA14Q9ULX7 337 aa12.14□□□□□ -0.47
DDX39A-210ENST00000589675 MRPS23Q9Y3D9 190 aaKnown RBP12.14□□□□□ -0.47
DDX39A-210ENST00000589675 MORC2Q9Y6X9 1032 aaPredicted RBP12.14□□□□□ -0.47
DDX39A-210ENST00000589675 GVINP1Q7Z2Y8 2422 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 FANCMQ8IYD8 2048 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 LACTBL1A8MY62 500 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 K7ENM7 598 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 STK25O00506 426 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 ZNF197O14709 1029 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 ECI2O75521 394 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 MARCKSP29966 332 aaPredicted RBP12.13□□□□□ -0.47
DDX39A-210ENST00000589675 TNFSF9P41273 254 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 GPC5P78333 572 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 PFKPQ01813 784 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 PTPAQ15257 358 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 ANGPT1Q15389 498 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 ENOX2Q16206 610 aaKnown RBP12.13□□□□□ -0.47
DDX39A-210ENST00000589675 SPATA1Q5VX52 437 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 MAP4K3Q8IVH8 894 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 BEST2Q8NFU1 509 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 KIF12Q96FN5 646 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 INTS4Q96HW7 963 aaKnown RBP12.13□□□□□ -0.47
DDX39A-210ENST00000589675 DDX23Q9BUQ8 820 aaKnown RBP12.13□□□□□ -0.47
DDX39A-210ENST00000589675 RPF1Q9H9Y2 349 aaKnown RBP12.13□□□□□ -0.47
DDX39A-210ENST00000589675 CYP4F11Q9HBI6 524 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 DLGAP2Q9P1A6 1054 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 STK17AQ9UEE5 414 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 CPSF3Q9UKF6 684 aaKnown RBP12.13□□□□□ -0.47
DDX39A-210ENST00000589675 DERAQ9Y315 318 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 SIT1Q9Y3P8 196 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 SRPRBQ9Y5M8 271 aaKnown RBP12.13□□□□□ -0.47
DDX39A-210ENST00000589675 INSL5Q9Y5Q6 135 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 STYXL1Q9Y6J8 313 aa12.13□□□□□ -0.47
DDX39A-210ENST00000589675 SCN1AP35498 2009 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 TBCAO75347 108 aaKnown RBP12.12□□□□□ -0.47
DDX39A-210ENST00000589675 SEC24AO95486 1093 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 KRT18P05783 430 aaKnown RBP12.12□□□□□ -0.47
DDX39A-210ENST00000589675 EPHA5P54756 1037 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 PRKCQQ04759 706 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 YWHAHQ04917 246 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-210ENST00000589675 DHX8Q14562 1220 aaKnown RBP12.12□□□□□ -0.47
DDX39A-210ENST00000589675 SLC5A9Q2M3M2 681 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 PRSS36Q5K4E3 855 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 SLFN12LQ6IEE8 588 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 SLC39A4Q6P5W5 647 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 LEMD2Q8NC56 503 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 PJA1Q8NG27 643 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 RASSF8Q8NHQ8 419 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 ELSPBP1Q96BH3 223 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 HVCN1Q96D96 273 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 EPSTI1Q96J88 318 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 MSTO1Q9BUK6 570 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 OSBPL6Q9BZF3 934 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 ASB7Q9H672 318 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 CCDC39Q9UFE4 941 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 CLIC4Q9Y696 253 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 F5P12259 2224 aa12.12□□□□□ -0.47
DDX39A-210ENST00000589675 EP300Q09472 2414 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-210ENST00000589675 VPS37CA5D8V6 355 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-210ENST00000589675 PRR23AA6NEV1 266 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms