RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 WDR6Q9NNW5 1121 aaKnown RBP20.88■□□□□ 0.93
CIRBP-221ENST00000589161 ATP6V1DQ9Y5K8 247 aa20.88■□□□□ 0.93
CIRBP-221ENST00000589161 HNRNPA1P09651 372 aaKnown RBP eCLIP20.87■□□□□ 0.93
CIRBP-221ENST00000589161 COL9A1P20849 921 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 PAX3P23760 479 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 CASP5P51878 434 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 ASIC1P78348 528 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 KRT85P78386 507 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 TMEM132DQ14C87 1099 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 PTPN21Q16825 1174 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 PPM1LQ5SGD2 360 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 JADE1Q6IE81 842 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 SLC8B1Q6J4K2 584 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 KCNH3Q9ULD8 1083 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 PCDHB8Q9UN66 801 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 ZDHHC9Q9Y397 364 aa20.87■□□□□ 0.93
CIRBP-221ENST00000589161 LDHAP00338 332 aaKnown RBP20.86■□□□□ 0.93
CIRBP-221ENST00000589161 C8AP07357 584 aa20.86■□□□□ 0.93
CIRBP-221ENST00000589161 GARTP22102 1010 aa20.86■□□□□ 0.93
CIRBP-221ENST00000589161 HOXA9P31269 272 aa20.86■□□□□ 0.93
CIRBP-221ENST00000589161 MRPL58Q14197 206 aaKnown RBP20.86■□□□□ 0.93
CIRBP-221ENST00000589161 RSPO2Q6UXX9 243 aaPredicted RBP20.86■□□□□ 0.93
CIRBP-221ENST00000589161 IKZF4Q9H2S9 585 aa20.86■□□□□ 0.93
CIRBP-221ENST00000589161 LIMD1Q9UGP4 676 aa20.86■□□□□ 0.93
CIRBP-221ENST00000589161 C2CD2Q9Y426 696 aa20.86■□□□□ 0.93
CIRBP-221ENST00000589161 CLUHO75153 1309 aa20.85■□□□□ 0.93
CIRBP-221ENST00000589161 M0QZQ0 153 aa20.85■□□□□ 0.93
CIRBP-221ENST00000589161 TBC1D4O60343 1298 aa20.85■□□□□ 0.93
CIRBP-221ENST00000589161 PRPF6O94906 941 aaKnown RBP20.85■□□□□ 0.93
CIRBP-221ENST00000589161 IL18RAPO95256 599 aa20.85■□□□□ 0.93
CIRBP-221ENST00000589161 CTXN3Q4LDR2 81 aa20.85■□□□□ 0.93
CIRBP-221ENST00000589161 CRELD2Q6UXH1 353 aaPredicted RBP20.85■□□□□ 0.93
CIRBP-221ENST00000589161 TRIM67Q6ZTA4 783 aa20.85■□□□□ 0.93
CIRBP-221ENST00000589161 CEP57L1Q8IYX8 460 aa20.85■□□□□ 0.93
CIRBP-221ENST00000589161 ZNF461Q8TAF7 563 aa20.85■□□□□ 0.93
CIRBP-221ENST00000589161 SPATA32Q96LK8 384 aa20.85■□□□□ 0.93
CIRBP-221ENST00000589161 FGFBP2Q9BYJ0 223 aa20.85■□□□□ 0.93
CIRBP-221ENST00000589161 PLXNA3P51805 1871 aa20.85■□□□□ 0.93
CIRBP-221ENST00000589161 XYLBO75191 536 aa20.84■□□□□ 0.93
CIRBP-221ENST00000589161 NFICP08651 508 aa20.84■□□□□ 0.93
CIRBP-221ENST00000589161 AARSP49588 968 aaKnown RBP eCLIP20.84■□□□□ 0.93
CIRBP-221ENST00000589161 GUCY2FP51841 1108 aa20.84■□□□□ 0.93
CIRBP-221ENST00000589161 ZNF280DQ6N043 979 aa20.84■□□□□ 0.93
CIRBP-221ENST00000589161 DSTYKQ6XUX3 929 aa20.84■□□□□ 0.93
CIRBP-221ENST00000589161 NT5DC4Q86YG4 428 aa20.84■□□□□ 0.93
CIRBP-221ENST00000589161 SLC7A14Q8TBB6 771 aa20.84■□□□□ 0.93
CIRBP-221ENST00000589161 LEO1Q8WVC0 666 aaPredicted RBP20.84■□□□□ 0.93
CIRBP-221ENST00000589161 FAM213AQ9BRX8 229 aa20.84■□□□□ 0.93
CIRBP-221ENST00000589161 OXCT2Q9BYC2 517 aaPredicted RBP20.84■□□□□ 0.93
CIRBP-221ENST00000589161 FBXL5Q9UKA1 691 aa20.84■□□□□ 0.93
CIRBP-221ENST00000589161 SORCS3Q9UPU3 1222 aa20.84■□□□□ 0.93
CIRBP-221ENST00000589161 VWA8A3KMH1 1905 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 KIAA0391O15091 583 aaKnown RBP20.83■□□□□ 0.93
CIRBP-221ENST00000589161 EIF3DO15371 548 aaKnown RBP eCLIP20.83■□□□□ 0.93
CIRBP-221ENST00000589161 ABLIM3O94929 683 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 POU2F2P09086 479 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 CMA1P23946 247 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 ELF1P32519 619 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 LILRA4P59901 499 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 ROR1Q01973 937 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 SIGLEC14Q08ET2 396 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 MTMR3Q13615 1198 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 C9orf57Q5W0N0 161 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 UNC13DQ70J99 1090 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 UBALD2Q8IYN6 164 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 TMEM130Q8N3G9 435 aa20.83■□□□□ 0.93
CIRBP-221ENST00000589161 SCAND2PQ9GZW5 306 aaPredicted RBP20.83■□□□□ 0.93
CIRBP-221ENST00000589161 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.83■□□□□ 0.93
CIRBP-221ENST00000589161 PVALEFA0A1B0GWK0 134 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 ARHGEF37A1IGU5 675 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 TMEM221A6NGB7 291 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 M0R296 226 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 PIRO00625 290 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 EXTL3O43909 919 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 OAZ2O95190 189 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 SLFN14P0C7P3 912 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 GBP2P32456 591 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-221ENST00000589161 AFMP43652 599 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 ARPP19P56211 112 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 YWHAHQ04917 246 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-221ENST00000589161 FAM26FQ5R3K3 315 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 TPGS2Q68CL5 300 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 ARMCX5Q6P1M9 558 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 USP37Q86T82 979 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 ZNF507Q8TCN5 953 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 HPS3Q969F9 1004 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 SAAL1Q96ER3 474 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 DPP3Q9NY33 737 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 USP25Q9UHP3 1055 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 MAFFQ9ULX9 164 aa20.82■□□□□ 0.92
CIRBP-221ENST00000589161 MTCL1Q9Y4B5 1905 aaKnown RBP20.82■□□□□ 0.92
CIRBP-221ENST00000589161 ANO9A1A5B4 782 aa20.81■□□□□ 0.92
CIRBP-221ENST00000589161 WDR27A2RRH5 827 aa20.81■□□□□ 0.92
CIRBP-221ENST00000589161 CCL16O15467 120 aa20.81■□□□□ 0.92
CIRBP-221ENST00000589161 ATF2P15336 505 aa20.81■□□□□ 0.92
CIRBP-221ENST00000589161 TYMPP19971 482 aa20.81■□□□□ 0.92
CIRBP-221ENST00000589161 EPM2AIP1Q7L775 607 aaPredicted RBP20.81■□□□□ 0.92
CIRBP-221ENST00000589161 BMP8AQ7Z5Y6 402 aa20.81■□□□□ 0.92
CIRBP-221ENST00000589161 GRASPQ7Z6J2 395 aaPredicted RBP20.81■□□□□ 0.92
CIRBP-221ENST00000589161 BRSK2Q8IWQ3 736 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms