RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 IGSF21Q96ID5 467 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 PLVAPQ9BX97 442 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 TMEM8AQ9HCN3 771 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 MARCH5Q9NX47 278 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 SIX4Q9UIU6 781 aa16.69■□□□□ 0.26
RPRD1A-208ENST00000589050 C5orf67F2Z3F1 127 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 GOLGA6L19H0YKK7 550 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 PIRO00625 290 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 TADA2AO75478 443 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 FGF18O76093 207 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 ITGB1P05556 798 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 PRKCSHP14314 528 aaPredicted RBP16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 CDK11BP21127 795 aaKnown RBP16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 MXI1P50539 228 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 TPM4P67936 248 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 KCNH2Q12809 1159 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 TRPC3Q13507 836 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 ZACNQ401N2 412 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 KRT39Q6A163 491 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 SCARA3Q6AZY7 606 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 C15orf39Q6ZRI6 1047 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 CXorf38Q8TB03 319 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 ARNTL2Q8WYA1 636 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 TMEM169Q96HH4 297 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 ZNF560Q96MR9 790 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 TUBGCP2Q9BSJ2 902 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 C11orf84Q9BUA3 381 aaPredicted RBP16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 HSD3B7Q9H2F3 369 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 ADAM28Q9UKQ2 775 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 CITO14578 2027 aa16.68■□□□□ 0.26
RPRD1A-208ENST00000589050 ANK1P16157 1881 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 GBF1Q92538 1859 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 TMEM189-UBE2V1I3L0A0 370 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 N4BP1O75113 896 aaKnown RBP16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 VNN1O95497 513 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 AFPP02771 609 aaKnown RBP16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 RB1P06400 928 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 ZNF18P17022 549 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 PNPLA4P41247 253 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 PIK3CAP42336 1068 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 FMO5P49326 533 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 MYL7Q01449 175 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 KRT17Q04695 432 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 NCOA4Q13772 614 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 MAN2A1Q16706 1144 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 CBWD6Q4V339 395 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 CBWD3Q5JTY5 395 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 HABP4Q5JVS0 413 aaKnown RBP16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 CBWD5Q5RIA9 395 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 CD300LGQ6UXG3 332 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 LRRC52Q8N7C0 313 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 RNF214Q8ND24 703 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 ANKRD20A12PQ8NF67 263 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 LRCH3Q96II8 777 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 ZNF576Q9H609 170 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 TAB2Q9NYJ8 693 aa16.67■□□□□ 0.26
RPRD1A-208ENST00000589050 TDRD15B5MCY1 1934 aaKnown RBP16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 TMEM265A0A087WTH1 108 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 CLSTN1O94985 981 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 CST3P01034 146 aaPredicted RBP16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 HLA-DRAP01903 254 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 TPM2P07951 284 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 ATP1A3P13637 1013 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 BRCC3P46736 316 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 TAF6P49848 677 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 LILRA4P59901 499 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 MYL6P60660 151 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 PLCB3Q01970 1234 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 MYO1EQ12965 1108 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 KRT31Q15323 416 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 SV2CQ496J9 727 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 VWA3BQ502W6 1294 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 FUT10Q6P4F1 479 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 TAS1R2Q8TE23 839 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 HPDLQ96IR7 371 aa16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 ALG13Q9NP73 1137 aaKnown RBP16.66■□□□□ 0.26
RPRD1A-208ENST00000589050 SF3B1O75533 1304 aaKnown RBP eCLIP16.66■□□□□ 0.262e-6■■■■■ 43.3
RPRD1A-208ENST00000589050 PDCD11Q14690 1871 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 RANBP2P49792 3224 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 H3BNC9 293 aa16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 I3L4J1 428 aa16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 PES1O00541 588 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 SPTLC1O15269 473 aa16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 TRAPPC3O43617 180 aa16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 PAX3P23760 479 aa16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 GPM6BQ13491 265 aa16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 DDX53Q86TM3 631 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 FBXL13Q8NEE6 735 aa16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 VN1R3Q9BXE9 311 aa16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 GPR62Q9BZJ7 368 aa16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 NDST4Q9H3R1 872 aa16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 LIMA1Q9UHB6 759 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 KIAA1671Q9BY89 1806 aa16.65■□□□□ 0.26
RPRD1A-208ENST00000589050 EPOPA6NHQ4 379 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 KPNA7A9QM74 516 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 ATICP31939 592 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 AARSP49588 968 aaKnown RBP eCLIP16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 CETN1Q12798 172 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 ELAVL2Q12926 359 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms