RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 NUB1Q9Y5A7 615 aa23.94■■□□□ 1.42
CAPNS1-205ENST00000588780 PROS1P07225 676 aa23.93■■□□□ 1.42
CAPNS1-205ENST00000588780 YARSP54577 528 aaKnown RBP23.93■■□□□ 1.42
CAPNS1-205ENST00000588780 TEAD2Q15562 447 aa23.93■■□□□ 1.42
CAPNS1-205ENST00000588780 STPG1Q5TH74 334 aa23.93■■□□□ 1.42
CAPNS1-205ENST00000588780 CD300LGQ6UXG3 332 aa23.93■■□□□ 1.42
CAPNS1-205ENST00000588780 RUFY3Q7L099 469 aa23.93■■□□□ 1.42
CAPNS1-205ENST00000588780 LEMD2Q8NC56 503 aa23.93■■□□□ 1.42
CAPNS1-205ENST00000588780 ZNF274Q96GC6 653 aaPredicted RBP23.93■■□□□ 1.42
CAPNS1-205ENST00000588780 GJB4Q9NTQ9 266 aa23.93■■□□□ 1.42
CAPNS1-205ENST00000588780 CDKL5O76039 1030 aa23.92■■□□□ 1.42
CAPNS1-205ENST00000588780 PAPSS2O95340 614 aaPredicted RBP23.92■■□□□ 1.42
CAPNS1-205ENST00000588780 CCDC192P0DO97 292 aa23.92■■□□□ 1.42
CAPNS1-205ENST00000588780 TPGS2Q68CL5 300 aa23.92■■□□□ 1.42
CAPNS1-205ENST00000588780 WDR5BQ86VZ2 330 aa23.92■■□□□ 1.42
CAPNS1-205ENST00000588780 GPIHBP1Q8IV16 184 aa23.92■■□□□ 1.42
CAPNS1-205ENST00000588780 RXFP3Q9NSD7 469 aa23.92■■□□□ 1.42
CAPNS1-205ENST00000588780 FBXL5Q9UKA1 691 aa23.92■■□□□ 1.42
CAPNS1-205ENST00000588780 CEP295Q9C0D2 2601 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 FAM205CA6NFA0 338 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 PODXLO00592 558 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 ZNF806P0C7X5 589 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 XRCC6P12956 609 aaKnown RBP eCLIP23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 CPB1P15086 417 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 MLLT6P55198 1093 aaPredicted RBP23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 EARS2Q5JPH6 523 aaKnown RBP23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 ATF7IP2Q5U623 682 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 CACNA2D4Q7Z3S7 1137 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 BSNDQ8WZ55 320 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 GPR88Q9GZN0 384 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 TRPV4Q9HBA0 871 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 C2orf42Q9NWW7 574 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 CEP72Q9P209 647 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 CYP46A1Q9Y6A2 500 aa23.91■■□□□ 1.42
CAPNS1-205ENST00000588780 SMIM28A0A1B0GU29 152 aa23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 SPECC1L-ADORA2AF8WAN1 911 aa23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 DPYSL4O14531 572 aa23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 SYN3O14994 580 aa23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 CHADO15335 359 aa23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 RPP40O75818 363 aaKnown RBP23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 KCNK5O95279 499 aa23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 OSTNP61366 133 aa23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 PON2Q15165 354 aa23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 HAUS6Q7Z4H7 955 aa23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 CCDC94Q9BW85 323 aaPredicted RBP23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 BRMS1Q9HCU9 246 aa23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 TOPORSQ9NS56 1045 aaPredicted RBP23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 SLC38A7Q9NVC3 462 aa23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 COL4A2P08572 1712 aa23.9■■□□□ 1.42
CAPNS1-205ENST00000588780 MOSPD3O75425 235 aa23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 HOXC13P31276 330 aa23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 NAMPTP43490 491 aa23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 PXNP49023 591 aaPredicted RBP23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 PPP2R5AQ15172 486 aa23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 ZNF280DQ6N043 979 aa23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 PSAPL1Q6NUJ1 521 aa23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 RALGPS2Q86X27 583 aaPredicted RBP23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 LOXL4Q96JB6 756 aa23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 IFT74Q96LB3 600 aa23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 KIFC3Q9BVG8 833 aa23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 SMOC1Q9H4F8 434 aa23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 AFF4Q9UHB7 1163 aaKnown RBP23.89■■□□□ 1.41
CAPNS1-205ENST00000588780 NCANO14594 1321 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 A0A1W2PRU2 124 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 ARHGEF35A5YM69 484 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 ARNTLO00327 626 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 TM4SF5O14894 197 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 DTNBO60941 627 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 EDN1P05305 212 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 CTHP32929 405 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 KRT2P35908 639 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 SOX4Q06945 474 aaPredicted RBP23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 NR5A1Q13285 461 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 RNF43Q68DV7 783 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 TXNDC11Q6PKC3 985 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 KBTBD6Q86V97 674 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 SHKBP1Q8TBC3 707 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 GAB3Q8WWW8 586 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 CCDC113Q9H0I3 377 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 ZMIZ1Q9ULJ6 1067 aa23.88■■□□□ 1.41
CAPNS1-205ENST00000588780 GREB1Q4ZG55 1949 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 C1QTNF9BB2RNN3 333 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 NEMFO60524 1076 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 EPN2O95208 641 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 C1QTNF9P0C862 333 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 MARCKSP29966 332 aaPredicted RBP23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 MCM4P33991 863 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 EFNA5P52803 228 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 PADI6Q6TGC4 694 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 UNQ6494/PRO21346Q6UXR6 183 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 RSPRY1Q96DX4 576 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 ZFYVE19Q96K21 471 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 NACC1Q96RE7 527 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 LSM14BQ9BX40 385 aaKnown RBP23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 GTSE1Q9NYZ3 720 aa23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 PDCD11Q14690 1871 aaKnown RBP23.87■■□□□ 1.41
CAPNS1-205ENST00000588780 TRIP11Q15643 1979 aa23.86■■□□□ 1.41
CAPNS1-205ENST00000588780 MYBPHLA2RUH7 354 aa23.86■■□□□ 1.41
CAPNS1-205ENST00000588780 HOXA6P31267 233 aa23.86■■□□□ 1.41
CAPNS1-205ENST00000588780 NT5DC1Q5TFE4 455 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms