RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC2-211	ENST00000588652	BPIFB4	P59827	614 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	MKRN4P	Q13434	485 aa	Predicted RBP	18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	KCTD2	Q14681	263 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	SEL1L2	Q5TEA6	688 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	IER5	Q5VY09	327 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	TTC27	Q6P3X3	843 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	TLCD1	Q96CP7	247 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	MMP19	Q99542	508 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	PCYOX1	Q9UHG3	505 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	GMNC	A6NCL1	334 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	ZBTB42	B2RXF5	422 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	SPOP	O43791	374 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	PAEP	P09466	180 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	PLTP	P55058	493 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	CUL2	Q13617	745 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	YTHDF3	Q7Z739	585 aa	Known RBP	18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	FBXO25	Q8TCJ0	367 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	CYFIP2	Q96F07	1278 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	CCDC113	Q9H0I3	377 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	GGA2	Q9UJY4	613 aa		18.73	■□□□□ 0.59
ERCC2-211	ENST00000588652	FAM189A1	O60320	539 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	SHBG	P04278	402 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	NUDT17	P0C025	328 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	PMS2	P54278	862 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	C9orf131	Q5VYM1	1079 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	CDCA2	Q69YH5	1023 aa	Predicted RBP	18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	PLPPR4	Q7Z2D5	763 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	FBXO16	Q8IX29	292 aa	Predicted RBP	18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	MCOLN2	Q8IZK6	566 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	OTUD6B	Q8N6M0	293 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	UPF1	Q92900	1129 aa	Known RBP eCLIP	18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	PCDHA3	Q9Y5H8	950 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	IGKV6-21	A0A0C4DH24	114 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	GAS2	O43903	313 aa	Known RBP	18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	TOM1L1	O75674	476 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	PYGM	P11217	842 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	RPL21	P46778	160 aa	Known RBP	18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	LAMTOR4	Q0VGL1	99 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	GPAT2	Q6NUI2	795 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	CCDC62	Q6P9F0	684 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	FASTKD5	Q7L8L6	764 aa	Known RBP	18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	LRRC71	Q8N4P6	559 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	C3orf20	Q8ND61	904 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	TCP11	Q8WWU5	503 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	CPA5	Q8WXQ8	436 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	MRPL4	Q9BYD3	311 aa	Known RBP	18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	PABPC3	Q9H361	631 aa	Known RBP	18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	EFCC1	Q9HA90	598 aa		18.72	■□□□□ 0.59
ERCC2-211	ENST00000588652	CYP1A1	P04798	512 aa	Predicted RBP	18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	CLTA	P09496	248 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	SRGAP2C	P0DJJ0	459 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	OSBP	P22059	807 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	TNFSF9	P41273	254 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	CDR1	P51861	262 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	NOP14	P78316	857 aa	Known RBP	18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	MXD4	Q14582	209 aa	Predicted RBP	18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	USP50	Q70EL3	339 aa	Predicted RBP	18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	BRSK2	Q8IWQ3	736 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	RNF149	Q8NC42	400 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	SPATA33	Q96N06	139 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	NUB1	Q9Y5A7	615 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	PODXL	O00592	558 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	CAND2	O75155	1236 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	GBP1	P32455	592 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	CENPC	Q03188	943 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	PLCB4	Q15147	1175 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	WDR78	Q5VTH9	848 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	TMEM270	Q6UE05	265 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	HOOK3	Q86VS8	718 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	DHX37	Q8IY37	1157 aa	Known RBP	18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	ZC3H15	Q8WU90	426 aa	Known RBP	18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	RAPGEF5	Q92565	580 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	RNF25	Q96BH1	459 aa	Predicted RBP	18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	TCHP	Q9BT92	498 aa		18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	AVEN	Q9NQS1	362 aa	Predicted RBP	18.71	■□□□□ 0.59
ERCC2-211	ENST00000588652	UMODL1	Q5DID0	1318 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	TCRBV7S2A1N4T	A0A589	114 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	YBX3	P16989	372 aa	Known RBP eCLIP	18.7	■□□□□ 0.58	7e-8	■□□□□ 8.2
ERCC2-211	ENST00000588652	TBXAS1	P24557	533 aa	Predicted RBP	18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	NCOA4	Q13772	614 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	CYP1B1	Q16678	543 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	SCARA3	Q6AZY7	606 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	CCDC137	Q6PK04	289 aa	Known RBP	18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	C6orf89	Q6UWU4	347 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	ZBTB33	Q86T24	672 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	COPS5	Q92905	334 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	ACO2	Q99798	780 aa	Known RBP	18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	MROH8	Q9H579	483 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	PARP2	Q9UGN5	583 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	ANAPC7	Q9UJX3	599 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	MTUS1	Q9ULD2	1270 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	CNTN6	Q9UQ52	1028 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	PCDHB4	Q9Y5E5	795 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	FSBP	O95073	299 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	RRM1	P23921	792 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	MAPK6	Q16659	721 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	TMEM63B	Q5T3F8	832 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	DENND2C	Q68D51	928 aa		18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	SLC13A5	Q86YT5	568 aa	Predicted RBP	18.7	■□□□□ 0.58
ERCC2-211	ENST00000588652	EXOC8	Q8IYI6	725 aa		18.7	■□□□□ 0.58

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